Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.208883	Psma5	proteasome (prosome, macropain) subunit, alpha type 5	3		26442
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | peptidase activity | proteasome core complex (sensu Eukarya) | ubiquitin-dependent protein catabolism
Human Homolog	PSMA5[proteasome (prosome, macropain) subunit, alpha type, 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAATATCC 22.8 0.0228 P8 Cb GC TTTCCCAAAA (3) 4.9 0.0049 P8 Cb GC GAAAAAATAA (7) 3.3 0.0033 P8 Cb GC ACATAAGAGC 1.6 0.0016 P8 Cb GC GGAAAAAATC (6) 1.6 0.0016 P8 Cb GC GGAGGAAGAA (5) 1.6 0.0016 P8 Cb GC TGGAAATTCT 1.6 0.0016 P8 Cb GC TTCCTCACTC (3) 1.6 0.0016 Cb medulloblastoma GAAAATATCC 9.2 0.0092 Cb medulloblastoma TTTCCCAAAA (3) 2.3 0.0023 P8 GC+1d culture GAAAATATCC 27.4 0.0274 P8 GC+1d culture TTTCCCAAAA (3) 9.1 0.0091 P8 GC+1d culture GAAAAAATAA (7) 5.7 0.0057 P8 GC+1d culture GGAGGAAGAA (5) 1.1 0.0011 P8 GC+SHH+1d culture GAAAATATCC 18.7 0.0187 P8 GC+SHH+1d culture TTTCCCAAAA (3) 7 0.007 P8 GC+SHH+1d culture TGAAACAGTT (2) 3.5 0.0035 P8 GC+SHH+1d culture GAAAAAATAA (7) 2.3 0.0023 P8 GC+SHH+1d culture GAAAATTTCC (3) 1.2 0.0012 P8 GC+SHH+1d culture GGAAAAAATC (6) 1.2 0.0012 3T3 fibroblasts GAAAATATCC 3.5 0.0035 E15 cortex GAAAATATCC 19.8 0.0198 E15 cortex GGAAATATCC (2) 4.9 0.0049 P1 cortex GAAAATATCC 9.1 0.0091 P1 cortex TGAAACAGTT (2) 4.5 0.0045 Hypothalamus GAAAATATCC 12.7 0.0127 Hypothalamus ACATAAGAGC 5.4 0.0054 Hypothalamus TGGAAATTCT 1.8 0.0018 Hypothalamus TTCCTCACTC (3) 1.8 0.0018 E12.5 retina GAAAATATCC 28.2 0.0282 E12.5 retina TTTCCCAAAA (3) 3.8 0.0038 E12.5 retina ACATAAGAGC 1.9 0.0019 E12.5 retina GAAAAAATAA (7) 1.9 0.0019 E12.5 retina GAAAATTTCC (3) 1.9 0.0019 E14.5 retina GAAAATATCC 27.3 0.0273 E14.5 retina GAAAATTTCC (3) 5.5 0.0055 E14.5 retina GAAAAAATAA (7) 1.8 0.0018 E14.5 retina TGGAAATTCT 1.8 0.0018 E14.5 retina TTTCCCAAAA (3) 1.8 0.0018 E16.5 retina GAAAATATCC 30.8 0.0308 E16.5 retina TTTCCCAAAA (3) 5.4 0.0054 E16.5 retina GAAAATTTCC (3) 1.8 0.0018 E16.5 retina GGAAAAAATC (6) 1.8 0.0018 E16.5 retina TGAAACAGTT (2) 1.8 0.0018 E18.5 retina GAAAATATCC 43.7 0.0437 E18.5 retina ACATAAGAGC 3.6 0.0036 E18.5 retina GAAAAAATAA (7) 3.6 0.0036 E18.5 retina GAAAATTTCC (3) 1.8 0.0018 E18.5 retina GGAAATATCC (2) 1.8 0.0018 E18.5 retina TGGAAATTCT 1.8 0.0018 P0.5 retina GAAAATATCC 15.7 0.0157 P0.5 retina TGAAACAGTT (2) 2 0.002 P0.5 retina TGGAAATTCT 2 0.002 P2.5 retina GAAAATATCC 12.3 0.0123 P2.5 retina TTTCCCAAAA (3) 5.3 0.0053 P2.5 retina GAAAAAATAA (7) 3.5 0.0035 P2.5 retina GAAAATTTCC (3) 3.5 0.0035 P2.5 retina ACATAAGAGC 1.8 0.0018 P4.5 retina GAAAATATCC 23.8 0.0238 P4.5 retina GAAAAAATAA (7) 5.9 0.0059 P4.5 retina TTTCCCAAAA (3) 4 0.004 P4.5 retina GAAAATTTCC (3) 2 0.002 P6.5 retina GAAAATATCC 16.7 0.0167 P6.5 retina GAAAAAATAA (7) 6.7 0.0067 P6.5 retina TTTCCCAAAA (3) 3.3 0.0033 P6.5 retina GGAGGAAGAA (5) 1.7 0.0017 P10.5 crx- retina GAAAATATCC 26 0.026 P10.5 crx- retina GAAAAAATAA (7) 3.7 0.0037 P10.5 crx- retina GGAGGAAGAA (5) 1.9 0.0019 P10.5 crx- retina TGAAACAGTT (2) 1.9 0.0019 P10.5 crx- retina TTTCCCAAAA (3) 1.9 0.0019 P10.5 crx+ retina GAAAATATCC 21.1 0.0211 P10.5 crx+ retina GAAAAAATAA (7) 1.9 0.0019 P10.5 crx+ retina GAAAATTTCC (3) 1.9 0.0019 P10.5 crx+ retina TGAAACAGTT (2) 1.9 0.0019 Adult retinal GAAAATATCC 7.4 0.0074 Adult retinal GGAAATATCC (2) 1.9 0.0019 ONL GAAAATATCC 15.3 0.0153 ONL GAAAAAATAA (7) 1.9 0.0019 ONL TTCCTCACTC (3) 1.9 0.0019 ONL TTTCCCAAAA (3) 1.9 0.0019