Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.208970
Pcqap
positive cofactor 2, multiprotein complex, glutamine/Q-rich-associated protein
16
16 9.9 cM
94112
Mm.208970
A230074L19Rik
RIKEN cDNA A230074L19 gene
16
319585
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 20 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGGAAAGCTG
(
2
)
TGAGGAGGAG
(
2
)
13.1
0.0131
P8 GC+1d culture
AGGAAAGCTG
(
2
)
CATACAGTGG
(
4
)
TGAGGAGGAG
(
2
)
5.7
0.0057
P8 GC+SHH+1d culture
AGGAAAGCTG
(
2
)
TGAGGAGGAG
(
2
)
3.5
0.0035
P1 cortex
TGAGGAGGAG
(
2
)
4.5
0.0045
Hypothalamus
CATACAGTGG
(
4
)
1.8
0.0018
E12.5 retina
AGGAAAGCTG
(
2
)
TGAGGAGGAG
(
2
)
5.7
0.0057
E16.5 retina
TGAGGAGGAG
(
2
)
1.8
0.0018
P0.5 retina
CATACAGTGG
(
4
)
TGAGGAGGAG
(
2
)
4
0.004
P4.5 retina
TGAGGAGGAG
(
2
)
4
0.004
P6.5 retina
AGGAAAGCTG
(
2
)
TGAGGAGGAG
(
2
)
5
0.005
P10.5 crx- retina
TGAGGAGGAG
(
2
)
1.9
0.0019
Adult retinal
TGAGGAGGAG
(
2
)
1.9
0.0019
ONL
AGGAAAGCTG
(
2
)
26.8
0.0268
