Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.209041	Nope	neighbor of Punc E11	9		56741
Gene Ontology	integral to plasma membrane
Human Homolog	NOPE[likely ortholog of mouse neighbor of Punc E11]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC TATCTGTCCC 3.3 0.0033 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TATCTGTCCC 4.6 0.0046 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TCTGCTTCAG (2) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TATCTGTCCC 5.9 0.0059 P8 GC+SHH+1d culture GCAAAGGACA (4) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GCAAAGGACA (4) 14 0.014 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex TATCTGTCCC 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus ATGGTGGAAA (8) 5.4 0.0054 Hypothalamus TATCTGTCCC 3.6 0.0036 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TATCTGTCCC 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina TATCTGTCCC 3.6 0.0036 E16.5 retina TCTGCTTCAG (2) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TATCTGTCCC 5.5 0.0055 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TATCTGTCCC 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TATCTGTCCC 8.8 0.0088 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TATCTGTCCC 7.9 0.0079 P6.5 retina CCTTTAATCC (355) 70 0.07 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina TATCTGTCCC 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal TCTGCTTCAG (2) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL TCTGCTTCAG (2) 1.9 0.0019