Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.209175
Mllt10
myeloid/lymphoid or mixed lineage-leukemia translocation to 10 homolog (Drosophila)
2
17354
Mm.209175
2810030E01Rik
RIKEN cDNA 2810030E01 gene
2
72668
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 86 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TATGAAAATG (
6
)
21.2
0.0212
P8 Cb GC
TATTAAAATG
(
3
)
8.2
0.0082
P8 Cb GC
TATGTAATAA (
7
)
6.5
0.0065
P8 Cb GC
TATTAAATGT (
10
)
4.9
0.0049
P8 Cb GC
AGAAAGAAAA (
8
)
3.3
0.0033
P8 Cb GC
AAGAAAACCA (
8
)
1.6
0.0016
P8 Cb GC
TGGAATTTTA
(
3
)
1.6
0.0016
Cb medulloblastoma
TATTAAATGT (
10
)
25.4
0.0254
Cb medulloblastoma
TATGAAAATG (
6
)
18.5
0.0185
Cb medulloblastoma
AGAAAGAAAA (
8
)
6.9
0.0069
Cb medulloblastoma
TATGTAATAA (
7
)
2.3
0.0023
P8 GC+1d culture
TATGAAAATG (
6
)
29.7
0.0297
P8 GC+1d culture
TATGTAATAA (
7
)
10.3
0.0103
P8 GC+1d culture
TATTAAATGT (
10
)
8
0.008
P8 GC+1d culture
TATTAAAATG
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TATGAAAATG (
6
)
18.7
0.0187
P8 GC+SHH+1d culture
TATGTAATAA (
7
)
11.7
0.0117
P8 GC+SHH+1d culture
TATTAAATGT (
10
)
4.7
0.0047
P8 GC+SHH+1d culture
TATTAAAATG
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
AAGAAAACCA (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
TATTAGTGTT (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AGAAAGAAAA (
8
)
1.2
0.0012
P8 GC+SHH+1d culture
TAATAAACAT
(
5
)
1.2
0.0012
3T3 fibroblasts
TATGAAAATG (
6
)
3.5
0.0035
E15 cortex
TATGAAAATG (
6
)
4.9
0.0049
E15 cortex
TATTAAATGT (
10
)
4.9
0.0049
P1 cortex
AGAAAGAAAA (
8
)
9.1
0.0091
P1 cortex
TATGAAAATG (
6
)
4.5
0.0045
P1 cortex
TATTAAAATG
(
3
)
4.5
0.0045
P1 cortex
TATTAGTGTT (
4
)
4.5
0.0045
Hypothalamus
TATTAAATGT (
10
)
30.8
0.0308
Hypothalamus
TATGAAAATG (
6
)
23.5
0.0235
Hypothalamus
TATGTAATAA (
7
)
3.6
0.0036
Hypothalamus
AAGAAAACCA (
8
)
1.8
0.0018
Hypothalamus
AGAAAGAAAA (
8
)
1.8
0.0018
E12.5 retina
TATGAAAATG (
6
)
7.5
0.0075
E12.5 retina
AGAAAGAAAA (
8
)
1.9
0.0019
E14.5 retina
TATGAAAATG (
6
)
21.9
0.0219
E14.5 retina
TATTAAAATG
(
3
)
10.9
0.0109
E14.5 retina
GAAAGGCACC (
4
)
1.8
0.0018
E16.5 retina
TATGAAAATG (
6
)
38
0.038
E16.5 retina
TATTAAATGT (
10
)
5.4
0.0054
E16.5 retina
TATTAGTGTT (
4
)
1.8
0.0018
E16.5 retina
TGGAATTTTA
(
3
)
1.8
0.0018
E18.5 retina
TATGAAAATG (
6
)
29.1
0.0291
E18.5 retina
TATTAAATGT (
10
)
14.6
0.0146
E18.5 retina
TATTAAAATG
(
3
)
9.1
0.0091
E18.5 retina
AGAAAGAAAA (
8
)
5.5
0.0055
E18.5 retina
TATGTAATAA (
7
)
1.8
0.0018
P0.5 retina
TATGAAAATG (
6
)
7.9
0.0079
P0.5 retina
TATTAAATGT (
10
)
5.9
0.0059
P0.5 retina
AGAAAGAAAA (
8
)
2
0.002
P2.5 retina
TATGAAAATG (
6
)
21.1
0.0211
P2.5 retina
TATTAAATGT (
10
)
5.3
0.0053
P2.5 retina
AGAAAGAAAA (
8
)
3.5
0.0035
P2.5 retina
TATGTAATAA (
7
)
3.5
0.0035
P2.5 retina
AAGAAAACCA (
8
)
1.8
0.0018
P2.5 retina
TATTAAAATG
(
3
)
1.8
0.0018
P2.5 retina
TATTAGTGTT (
4
)
1.8
0.0018
P4.5 retina
TATGAAAATG (
6
)
11.9
0.0119
P4.5 retina
AGAAAGAAAA (
8
)
5.9
0.0059
P4.5 retina
TATGTAATAA (
7
)
4
0.004
P4.5 retina
TATTAAAATG
(
3
)
4
0.004
P4.5 retina
TATTAAATGT (
10
)
4
0.004
P6.5 retina
TATGAAAATG (
6
)
18.3
0.0183
P6.5 retina
TATTAAATGT (
10
)
8.3
0.0083
P6.5 retina
TATGTAATAA (
7
)
6.7
0.0067
P6.5 retina
AGAAAGAAAA (
8
)
5
0.005
P6.5 retina
GAAAGGCACC (
4
)
3.3
0.0033
P6.5 retina
TATTAAAATG
(
3
)
3.3
0.0033
P10.5 crx- retina
TATGAAAATG (
6
)
40.9
0.0409
P10.5 crx- retina
TATTAAAATG
(
3
)
11.1
0.0111
P10.5 crx- retina
TATTAAATGT (
10
)
3.7
0.0037
P10.5 crx- retina
TATGTAATAA (
7
)
1.9
0.0019
P10.5 crx- retina
TATTAGTGTT (
4
)
1.9
0.0019
P10.5 crx+ retina
TATGAAAATG (
6
)
19.2
0.0192
P10.5 crx+ retina
TATTAAATGT (
10
)
3.8
0.0038
P10.5 crx+ retina
TATTAGTGTT (
4
)
1.9
0.0019
Adult retinal
TATGAAAATG (
6
)
9.3
0.0093
Adult retinal
TAATAAACAT
(
5
)
1.9
0.0019
Adult retinal
TATTAAATGT (
10
)
1.9
0.0019
ONL
TATGAAAATG (
6
)
19.2
0.0192
ONL
TATTAAATGT (
10
)
3.8
0.0038
ONL
TAATAAACAT
(
5
)
1.9
0.0019
ONL
TATGTAATAA (
7
)
1.9
0.0019
ONL
TGGAATTTTA
(
3
)
1.9
0.0019
