Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20938	Wbp4	WW domain binding protein 4	14		22380
Gene Ontology	nucleic acid binding | nucleus | protein binding | RNA binding | spliceosome complex
Human Homolog	WBP4[WW domain binding protein 4 (formin binding protein 21)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC TAAGAATAGC 4.9 0.0049 P8 Cb GC GAGTGCTTAT (4) 1.6 0.0016 P8 Cb GC GCGGGGATGT (2) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma TAAGAATAGC 6.9 0.0069 Cb medulloblastoma GCGGGGATGT (2) 2.3 0.0023 Cb medulloblastoma GGAATAAAAG (7) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture TAAGAATAGC 5.7 0.0057 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture TAAGAATAGC 3.5 0.0035 P8 GC+SHH+1d culture GAGTGCTTAT (4) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GCGGGGATGT (2) 17.5 0.0175 3T3 fibroblasts GAGGCAGCCG 14 0.014 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GAGGCAGCCG 34.6 0.0346 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 E15 cortex GCGGGGATGT (2) 9.9 0.0099 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GAGGCAGCCG 4.5 0.0045 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus TAAGAATAGC 18.1 0.0181 Hypothalamus GAGGCAGCCG 3.6 0.0036 Hypothalamus GGAATAAAAG (7) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina TAAGAATAGC 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina TAAGAATAGC 7.2 0.0072 E16.5 retina GAGGCAGCCG 5.4 0.0054 E16.5 retina GAGTGCTTAT (4) 1.8 0.0018 E16.5 retina GGGAAGACCT (4) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina TAAGAATAGC 5.5 0.0055 E18.5 retina GAGGCAGCCG 3.6 0.0036 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina GCGGGGATGT (2) 2 0.002 P0.5 retina GGAATAAAAG (7) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina TAAGAATAGC 7 0.007 P2.5 retina GGGAAGACCT (4) 3.5 0.0035 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina TAAGAATAGC 11.9 0.0119 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina GAGTGCTTAT (4) 1.7 0.0017 P6.5 retina GGGAAGACCT (4) 1.7 0.0017 P6.5 retina TAAGAATAGC 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina TAAGAATAGC 5.6 0.0056 P10.5 crx- retina GGGAAGACCT (4) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina TAAGAATAGC 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal TAAGAATAGC 5.6 0.0056 Adult retinal GCGGGGATGT (2) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL TAAGAATAGC 3.8 0.0038