Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.209385
Morf4l1
mortality factor 4 like 1
9
21761
Mm.209385
Lpp
LIM domain containing preferred translocation partner in lipoma
16
210126
Mm.209385
9430040K09Rik
RIKEN cDNA 9430040K09 gene
16
77280
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AACTTAAAAA (
12
)
4.9
0.0049
P8 Cb GC
CAAGAACAAA (
7
)
3.3
0.0033
P8 Cb GC
TGATCTGCCT
(
6
)
3.3
0.0033
P8 Cb GC
ATGGTTTTCT (
5
)
1.6
0.0016
P8 Cb GC
ATTTTTCCTG (
7
)
1.6
0.0016
Cb medulloblastoma
AACTTAAAAA (
12
)
67.1
0.0671
Cb medulloblastoma
TGATCTGCCT
(
6
)
9.2
0.0092
Cb medulloblastoma
ATGGTTTTCT (
5
)
2.3
0.0023
Cb medulloblastoma
TTTGAATATG (
4
)
2.3
0.0023
P8 GC+1d culture
TTTGAATATG (
4
)
16
0.016
P8 GC+1d culture
AACTTAAAAA (
12
)
8
0.008
P8 GC+1d culture
ATTTTTCCTG (
7
)
1.1
0.0011
P8 GC+1d culture
CAAGAACAAA (
7
)
1.1
0.0011
P8 GC+1d culture
CACTTCCTTC (
9
)
1.1
0.0011
P8 GC+1d culture
TGATCTGCCT
(
6
)
1.1
0.0011
P8 GC+1d culture
TTTTAATATA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTGAATATG (
4
)
11.7
0.0117
P8 GC+SHH+1d culture
AACTTAAAAA (
12
)
5.9
0.0059
P8 GC+SHH+1d culture
TGAAAAAAGA (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
ATGGTTTTCT (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTTAATATA
(
3
)
1.2
0.0012
3T3 fibroblasts
TGATCTGCCT
(
6
)
17.5
0.0175
3T3 fibroblasts
TTTGAATATG (
4
)
3.5
0.0035
E15 cortex
TGATCTGCCT
(
6
)
19.8
0.0198
E15 cortex
ATTTTTCCTG (
7
)
4.9
0.0049
E15 cortex
CAAGAACAAA (
7
)
4.9
0.0049
E15 cortex
TGAAAAAAGA (
7
)
4.9
0.0049
P1 cortex
AACTTAAAAA (
12
)
18.2
0.0182
Hypothalamus
AACTTAAAAA (
12
)
12.7
0.0127
Hypothalamus
TGATCTGCCT
(
6
)
3.6
0.0036
Hypothalamus
TTTTAATATA
(
3
)
1.8
0.0018
E12.5 retina
TGATCTGCCT
(
6
)
3.8
0.0038
E14.5 retina
AACTTAAAAA (
12
)
9.1
0.0091
E14.5 retina
ATTTTTCCTG (
7
)
1.8
0.0018
E16.5 retina
AACTTAAAAA (
12
)
9.1
0.0091
E16.5 retina
ATGGTTTTCT (
5
)
1.8
0.0018
E16.5 retina
CAAGAACAAA (
7
)
1.8
0.0018
E16.5 retina
TGATCTGCCT
(
6
)
1.8
0.0018
E18.5 retina
AACTTAAAAA (
12
)
5.5
0.0055
E18.5 retina
ATGGTTTTCT (
5
)
1.8
0.0018
E18.5 retina
CAAGAACAAA (
7
)
1.8
0.0018
E18.5 retina
TGATCTGCCT
(
6
)
1.8
0.0018
P0.5 retina
TGATCTGCCT
(
6
)
3.9
0.0039
P0.5 retina
AACTTAAAAA (
12
)
2
0.002
P2.5 retina
AACTTAAAAA (
12
)
1.8
0.0018
P2.5 retina
ATGGTTTTCT (
5
)
1.8
0.0018
P2.5 retina
TGATCTGCCT
(
6
)
1.8
0.0018
P2.5 retina
TTTTAATATA
(
3
)
1.8
0.0018
P4.5 retina
AACTTAAAAA (
12
)
9.9
0.0099
P4.5 retina
AAATGAGGCA
(
3
)
2
0.002
P6.5 retina
AACTTAAAAA (
12
)
11.7
0.0117
P6.5 retina
TGATCTGCCT
(
6
)
5
0.005
P6.5 retina
AAATGAGGCA
(
3
)
1.7
0.0017
P10.5 crx- retina
AACTTAAAAA (
12
)
13
0.013
P10.5 crx- retina
TGATCTGCCT
(
6
)
5.6
0.0056
P10.5 crx- retina
AAATGAGGCA
(
3
)
3.7
0.0037
P10.5 crx- retina
ATGGTTTTCT (
5
)
1.9
0.0019
P10.5 crx- retina
CAAGAACAAA (
7
)
1.9
0.0019
P10.5 crx+ retina
AACTTAAAAA (
12
)
7.7
0.0077
P10.5 crx+ retina
CAAGAACAAA (
7
)
1.9
0.0019
Adult retinal
AAATGAGGCA
(
3
)
7.4
0.0074
Adult retinal
AACTTAAAAA (
12
)
3.7
0.0037
Adult retinal
ATTTTTCCTG (
7
)
1.9
0.0019
ONL
CACTTCCTTC (
9
)
1.9
0.0019
