Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.209419	D330004O07Rik	RIKEN cDNA D330004O07 gene	18		319397
Mm.209419	Hspa9a	heat shock protein, A	18	18 15.0 cM	15526
Gene Ontology	ATP binding | cytoplasm | mitochondrion | protein binding | protein folding | protein-nucleus export | response to heat | response to unfolded protein
Human Homolog	HSPA9B[heat shock 70kDa protein 9B (mortalin-2)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCCTGAGGC (6) 21.2 0.0212 P8 Cb GC CAGCTGAAAA (4) 3.3 0.0033 P8 Cb GC TAAAGGGGTG (5) 3.3 0.0033 P8 Cb GC AGGCTTTTAG (4) 1.6 0.0016 P8 Cb GC GGGAGTGACT (3) 1.6 0.0016 Cb medulloblastoma GGCCTGAGGC (6) 27.7 0.0277 Cb medulloblastoma GGGAGTGACT (3) 4.6 0.0046 Cb medulloblastoma AGGCTTTTAG (4) 2.3 0.0023 Cb medulloblastoma CAGCTGAAAA (4) 2.3 0.0023 Cb medulloblastoma TAAAGGGGTG (5) 2.3 0.0023 P8 GC+1d culture GGCCTGAGGC (6) 5.7 0.0057 P8 GC+1d culture GGGGGCGGGG (10) 3.4 0.0034 P8 GC+1d culture TAAAGGGGTG (5) 3.4 0.0034 P8 GC+1d culture ACACAGAAAC (8) 2.3 0.0023 P8 GC+1d culture AGGCTTATAC (2) 1.1 0.0011 P8 GC+1d culture CAGCTGAAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture GGCCTGAGGC (6) 14.1 0.0141 P8 GC+SHH+1d culture AGGCTTATAC (2) 3.5 0.0035 P8 GC+SHH+1d culture GGGAGTGACT (3) 2.3 0.0023 P8 GC+SHH+1d culture AAAAAGGGGG (7) 1.2 0.0012 P8 GC+SHH+1d culture CAGCTGAAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture GGGGGCGGGG (10) 1.2 0.0012 P8 GC+SHH+1d culture TAAAGGGGTG (5) 1.2 0.0012 3T3 fibroblasts GGCCTGAGGC (6) 24.5 0.0245 3T3 fibroblasts ACACAGAAAC (8) 10.5 0.0105 3T3 fibroblasts GGGAGTGACT (3) 3.5 0.0035 E15 cortex GGCCTGAGGC (6) 14.8 0.0148 E15 cortex GGGAGTGACT (3) 4.9 0.0049 E15 cortex GGGGGCGGGG (10) 4.9 0.0049 P1 cortex ACACAGAAAC (8) 22.7 0.0227 Hypothalamus GGCCTGAGGC (6) 23.5 0.0235 Hypothalamus ACACAGAAAC (8) 3.6 0.0036 Hypothalamus TAAAGGGGTG (5) 1.8 0.0018 E12.5 retina GGCCTGAGGC (6) 26.3 0.0263 E12.5 retina GGGGGCGGGG (10) 3.8 0.0038 E12.5 retina TAAAGGGGTG (5) 3.8 0.0038 E12.5 retina AAAAAGGGGG (7) 1.9 0.0019 E12.5 retina AATAATTCCT (3) 1.9 0.0019 E12.5 retina GGGAGTGACT (3) 1.9 0.0019 E14.5 retina GGCCTGAGGC (6) 21.9 0.0219 E14.5 retina GGGAGTGACT (3) 3.6 0.0036 E16.5 retina GGCCTGAGGC (6) 27.2 0.0272 E16.5 retina TAAAGGGGTG (5) 3.6 0.0036 E16.5 retina AAAAAGGGGG (7) 1.8 0.0018 E16.5 retina GGGAGTGACT (3) 1.8 0.0018 E16.5 retina GTACAGGTAG (2) 1.8 0.0018 E18.5 retina GGCCTGAGGC (6) 14.6 0.0146 E18.5 retina GGGAGTGACT (3) 1.8 0.0018 E18.5 retina GTTCTGGAGG (5) 1.8 0.0018 P0.5 retina GGCCTGAGGC (6) 17.7 0.0177 P0.5 retina AATAATTCCT (3) 2 0.002 P0.5 retina GGGAGTGACT (3) 2 0.002 P0.5 retina TAAAGGGGTG (5) 2 0.002 P2.5 retina GGCCTGAGGC (6) 26.4 0.0264 P2.5 retina AAAAAGGGGG (7) 1.8 0.0018 P2.5 retina ACACAGAAAC (8) 1.8 0.0018 P2.5 retina AGGCTTATAC (2) 1.8 0.0018 P2.5 retina AGGCTTTTAG (4) 1.8 0.0018 P2.5 retina GGGGGCGGGG (10) 1.8 0.0018 P2.5 retina TAAAGGGGTG (5) 1.8 0.0018 P4.5 retina GGCCTGAGGC (6) 27.7 0.0277 P4.5 retina GTACAGGTAG (2) 4 0.004 P6.5 retina GGCCTGAGGC (6) 43.4 0.0434 P6.5 retina AATAATTCCT (3) 1.7 0.0017 P6.5 retina CAGCTGAAAA (4) 1.7 0.0017 P6.5 retina GGGAGTGACT (3) 1.7 0.0017 P6.5 retina TAAAGGGGTG (5) 1.7 0.0017 P10.5 crx- retina GGCCTGAGGC (6) 18.6 0.0186 P10.5 crx- retina GTTCTGGAGG (5) 1.9 0.0019 P10.5 crx- retina TAAAGGGGTG (5) 1.9 0.0019 P10.5 crx+ retina GGCCTGAGGC (6) 17.3 0.0173 P10.5 crx+ retina CAGCTGAAAA (4) 1.9 0.0019 P10.5 crx+ retina GTACAGGTAG (2) 1.9 0.0019 P10.5 crx+ retina TAAAGGGGTG (5) 1.9 0.0019 Adult retinal GGCCTGAGGC (6) 11.1 0.0111 Adult retinal GTTCTGGAGG (5) 1.9 0.0019 Adult retinal TAAAGGGGTG (5) 1.9 0.0019 ONL GGCCTGAGGC (6) 7.7 0.0077 ONL AGGCTTTTAG (4) 1.9 0.0019