Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.209568	Scp2	sterol carrier protein 2, liver	4	4 52.0 cM	20280
Gene Ontology	acyl-CoA metabolism | lipid binding | lipid transport | mitochondrion | peroxisome | peroxisome organization and biogenesis | sterol carrier activity | sterol carrier protein X-related thiolase activity | transport
Human Homolog	SCP2[sterol carrier protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGATAGATTT GCCAAACCAA (2) GGTACATTAT 22.8 0.0228 Cb medulloblastoma GATACCATTA GCCAAACCAA (2) GGACCTCCTG 23.1 0.0231 P8 GC+1d culture AGATAGATTT GATACCATTA GCCAAACCAA (2) 16 0.016 P8 GC+SHH+1d culture AAACCATTAA (2) GATACCATTA GCCAAACCAA (2) 15.3 0.0153 3T3 fibroblasts GGACCTCCTG 3.5 0.0035 E15 cortex GCCAAACCAA (2) GGACCTCCTG 29.6 0.0296 P1 cortex GATACCATTA GCCAAACCAA (2) 9 0.009 Hypothalamus AGATAGATTT CAATCCCAAC GATACCATTA GCCAAACCAA (2) GGACCTCCTG GGTACATTAT TGGCCCACCC 25.2 0.0252 E12.5 retina AAACCATTAA (2) AGATAGATTT CAATCCCAAC GATACCATTA GCCAAACCAA (2) GCTCTGATAC GGTACATTAT 50.9 0.0509 E14.5 retina GATACCATTA GCCAAACCAA (2) GCTCTGATAC GGTACATTAT TGGCCCACCC 23.6 0.0236 E16.5 retina AGATAGATTT CAATCCCAAC GATACCATTA GCCAAACCAA (2) GCTCTGATAC GGTACATTAT 36.2 0.0362 E18.5 retina GCCAAACCAA (2) GGTACATTAT 47.3 0.0473 P0.5 retina AGATAGATTT GATACCATTA GCCAAACCAA (2) GGTACATTAT 25.6 0.0256 P2.5 retina AAACCATTAA (2) GATACCATTA GCCAAACCAA (2) TGGCCCACCC 42.4 0.0424 P4.5 retina AGATAGATTT CTATTCGGGA GATACCATTA GCCAAACCAA (2) GCTCTGATAC 47.6 0.0476 P6.5 retina AGATAGATTT GATACCATTA GCCAAACCAA (2) 26.7 0.0267 P10.5 crx- retina AGATAGATTT GATACCATTA GCCAAACCAA (2) GCTCTGATAC TGGCCCACCC 54 0.054 P10.5 crx+ retina CAATCCCAAC GCCAAACCAA (2) GGTACATTAT 71.1 0.0711 Adult retinal AGATAGATTT GATACCATTA GCCAAACCAA (2) 37.1 0.0371 ONL AGATAGATTT CAATCCCAAC GATACCATTA GCCAAACCAA (2) GCTCTGATAC 38.2 0.0382