Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.209715	C530001D20Rik	RIKEN cDNA C530001D20 gene	3		77655
Mm.209715	Col11a1	procollagen, type XI, alpha 1	3	3 53.1 cM	12814
Gene Ontology	cartilage condensation | cell adhesion | collagen | collagen fibril organization | cytoplasm | extracellular matrix | extracellular matrix structural constituent | extracellular matrix structural constituent conferring tensile strength | phosphate transport | proteoglycan metabolism | structural molecule activity
Human Homolog	COL11A1[collagen, type XI, alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 16 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAATA (3) ACAATTGTGG (2) 3.2 0.0032 Cb medulloblastoma AAAAAAAATA (3) 4.6 0.0046 P8 GC+1d culture AAAAAAAATA (3) 1.1 0.0011 P8 GC+SHH+1d culture ACAATTGTGG (2) GACCTTCTGG (2) 2.4 0.0024 E15 cortex GACCTTCTGG (2) 4.9 0.0049 Hypothalamus ACAATTGTGG (2) 5.4 0.0054 E12.5 retina ACAATTGTGG (2) 3.8 0.0038 E14.5 retina GACCTTCTGG (2) 1.8 0.0018 E16.5 retina AAAAAAAATA (3) 1.8 0.0018 E18.5 retina AAAAAAAATA (3) 3.6 0.0036 P4.5 retina AAAAAAAATA (3) ACAATTGTGG (2) 7.9 0.0079 Adult retinal GACCTTCTGG (2) 1.9 0.0019 ONL AAAAAAAATA (3) 5.7 0.0057