Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.210155	Txnrd1	thioredoxin reductase 1	10		50493
Mm.210155	9130221J17Rik	RIKEN cDNA 9130221J17 gene	10		319693
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTAGTTACC (2) CACCCAGACC (3) CATCGCCAGT CTGGCTGAGG (2) GAGGAAAAAA (2) GCTGCTGGGG GGAATGGACA (3) TATTTTTATT (3) 47.2 0.0472 Cb medulloblastoma AAAGACCCAA CACCCAGACC (3) CATCGCCAGT GCTCTTGGCT (3) TATTTTTATT (3) 67 0.067 P8 GC+1d culture AAAGACCCAA ATTAGTTACC (2) CATCGCCAGT GGAATGGACA (3) TATTTTTATT (3) 30.7 0.0307 P8 GC+SHH+1d culture AAAGACCCAA CACCCAGACC (3) CATCGCCAGT CTGGCTGAGG (2) GAGGAAAAAA (2) GCTCTTGGGT (5) TATTTTTATT (3) TTTTCCACCA 53.9 0.0539 3T3 fibroblasts CTGGTGAGAC (2) 3.5 0.0035 E15 cortex CATCGCCAGT 4.9 0.0049 P1 cortex CATCGCCAGT GCTCTTGGCT (3) 22.7 0.0227 Hypothalamus CACCCAGACC (3) CATCGCCAGT CTGGCTGAGG (2) GGAATGGACA (3) TATTTTTATT (3) 83.2 0.0832 E12.5 retina ATTAGTTACC (2) CACCCAGACC (3) CATCGCCAGT GAGGAAAAAA (2) GCAGAGAGGT GCTGCTGGGG GTGGCTTTCA TATTTTTATT (3) 24.6 0.0246 E14.5 retina ATTAGTTACC (2) CACCCAGACC (3) CATCGCCAGT GAGGAAAAAA (2) GCAGAGAGGT TATTTTTATT (3) TTTTCCACCA 25.5 0.0255 E16.5 retina CACCCAGACC (3) CATCGCCAGT GAGGAAAAAA (2) GCTCTTGGGT (5) TATTTTTATT (3) TGGATCTCTT 27.1 0.0271 E18.5 retina CACCCAGACC (3) CATCGCCAGT CTATGTCTCT CTGGTGAGAC (2) TATTTTTATT (3) 27.3 0.0273 P0.5 retina CACCCAGACC (3) CATCGCCAGT CTATGTCTCT GCTGCTGGGG GTGGCTTTCA TGGATCTCTT 19.7 0.0197 P2.5 retina CACCCAGACC (3) CATCGCCAGT CTATGTCTCT GAGGAAAAAA (2) GCAGAGAGGT GCTCTTGGCT (3) GCTGCTGGGG TATTTTTATT (3) 21.4 0.0214 P4.5 retina CACCCAGACC (3) CATCGCCAGT CTATGTCTCT TATTTTATAA (2) TATTTTTATT (3) 43.6 0.0436 P6.5 retina ATTAGTTACC (2) CACCCAGACC (3) CATCGCCAGT CTATGTCTCT GAGGAAAAAA (2) GCTCTTGGCT (3) GCTGCTGGGG TATTTTATAA (2) TATTTTTATT (3) 53.4 0.0534 P10.5 crx- retina CACCCAGACC (3) CATCGCCAGT GCTCTTGGCT (3) 65 0.065 P10.5 crx+ retina CACCCAGACC (3) CATCGCCAGT GCAGAGAGGT GCTCTTGGCT (3) TATTTTATAA (2) TATTTTTATT (3) TGGATCTCTT 44.1 0.0441 Adult retinal CACCCAGACC (3) CATCGCCAGT GAGGAAAAAA (2) GCTCTTGGCT (3) GCTGCTGGGG 63 0.063 ONL ATTAGTTACC (2) CATCGCCAGT GAGGAAAAAA (2) GCTGCTGGGG GGAATGGACA (3) GTGGCTTTCA TATTTTTATT (3) 17.1 0.0171