| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCCGGGTGGG (5) TTGAGTTACT (5)
| 21.2 | 0.0212 |
| Cb medulloblastoma | AGCAACATTA (5) CGCTTGGTGT (5) GCCGGGTGGG (5) TTGAGTTACT (5)
| 18.4 | 0.0184 |
| P8 GC+1d culture | TTGAGTTACT (5)
| 20.5 | 0.0205 |
| P8 GC+SHH+1d culture | TTGAGTTACT (5)
| 11.7 | 0.0117 |
| E15 cortex | AAGGGTCCCC (5)
| 4.9 | 0.0049 |
| P1 cortex | AGCAACATTA (5) GGTGTGTGGG (5)
| 9 | 0.009 |
| Hypothalamus | CGCTTGGTGT (5) GGTGTGTGGG (5) TTGAGTTACT (5)
| 12.6 | 0.0126 |
| E14.5 retina | TTGAGTTACT (5)
| 3.6 | 0.0036 |
| E16.5 retina | GGTGTGTGGG (5) TTGAGTTACT (5)
| 5.4 | 0.0054 |
| P0.5 retina | AGCAACATTA (5)
| 2 | 0.002 |
| P2.5 retina | CGCTTGGTGT (5) TTGAGTTACT (5)
| 5.3 | 0.0053 |
| P4.5 retina | ATTAAGCCAC (5) GGTGTGTGGG (5) TTGAGTTACT (5)
| 11.9 | 0.0119 |
| P6.5 retina | AGCAACATTA (5) TTGAGTTACT (5)
| 5 | 0.005 |
| P10.5 crx- retina | ATTAAGCCAC (5) TTGAGTTACT (5)
| 13 | 0.013 |
| P10.5 crx+ retina | GGTGTGTGGG (5)
| 1.9 | 0.0019 |
| Adult retinal | TTGAGTTACT (5)
| 1.9 | 0.0019 |
| ONL | AAGGGTCCCC (5) TTGAGTTACT (5)
| 5.7 | 0.0057 |