Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.210996
A930014I12Rik
RIKEN cDNA A930014I12 gene
18
77805
Human Homolog
EFO1[establishment factor-like protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTATATG (
5
)
17.9
0.0179
P8 Cb GC
CAGTAGATAA
(
2
)
1.6
0.0016
P8 Cb GC
TGAAAAGAAA
(
6
)
1.6
0.0016
Cb medulloblastoma
TGTGTATATG (
5
)
4.6
0.0046
Cb medulloblastoma
CAGTAGATAA
(
2
)
2.3
0.0023
Cb medulloblastoma
TGAAAAGAAA
(
6
)
2.3
0.0023
P8 GC+1d culture
TGTGTATATG (
5
)
32
0.032
P8 GC+1d culture
TGAAAAGAAA
(
6
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTGTATATG (
5
)
25.8
0.0258
P8 GC+SHH+1d culture
TGAAAAGAAA
(
6
)
1.2
0.0012
3T3 fibroblasts
TGTGTATATG (
5
)
10.5
0.0105
E15 cortex
TGAAAAGAAA
(
6
)
4.9
0.0049
P1 cortex
TGTGTATATG (
5
)
13.6
0.0136
P1 cortex
CAGTAGATAA
(
2
)
4.5
0.0045
P1 cortex
TGAAAAGAAA
(
6
)
4.5
0.0045
Hypothalamus
CAGTAGATAA
(
2
)
3.6
0.0036
Hypothalamus
ATTTTTATTT (
10
)
1.8
0.0018
Hypothalamus
TGAAAAGAAA
(
6
)
1.8
0.0018
Hypothalamus
TGTGTATATG (
5
)
1.8
0.0018
E12.5 retina
TGTGTATATG (
5
)
5.6
0.0056
E12.5 retina
CAGTAGATAA
(
2
)
1.9
0.0019
E14.5 retina
TGTGTATATG (
5
)
7.3
0.0073
E14.5 retina
CAGTAGATAA
(
2
)
3.6
0.0036
E16.5 retina
TGTGTATATG (
5
)
21.7
0.0217
E16.5 retina
CAGTAGATAA
(
2
)
3.6
0.0036
E18.5 retina
TGTGTATATG (
5
)
9.1
0.0091
E18.5 retina
CAGTAGATAA
(
2
)
3.6
0.0036
P0.5 retina
TGTGTATATG (
5
)
27.5
0.0275
P0.5 retina
CAGTAGATAA
(
2
)
7.9
0.0079
P0.5 retina
TGAAAAGAAA
(
6
)
3.9
0.0039
P2.5 retina
TGTGTATATG (
5
)
14.1
0.0141
P2.5 retina
CAGTAGATAA
(
2
)
5.3
0.0053
P2.5 retina
TGAAAAGAAA
(
6
)
3.5
0.0035
P4.5 retina
TGTGTATATG (
5
)
11.9
0.0119
P6.5 retina
TGTGTATATG (
5
)
5
0.005
P6.5 retina
ATTTTTATTT (
10
)
1.7
0.0017
P10.5 crx- retina
CAGTAGATAA
(
2
)
11.1
0.0111
P10.5 crx- retina
TGTGTATATG (
5
)
3.7
0.0037
P10.5 crx+ retina
TGAAAAGAAA
(
6
)
1.9
0.0019
ONL
ATTTTTATTT (
10
)
3.8
0.0038
ONL
TGTGTATATG (
5
)
3.8
0.0038
ONL
CAGTAGATAA
(
2
)
1.9
0.0019
