Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21118	Iars	isoleucine-tRNA synthetase	13		105148
Mm.21118	2510016L12Rik	RIKEN cDNA 2510016L12 gene	13		70306
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC TTGGGGGAGT (5) 3.3 0.0033 P8 Cb GC GCTCTGGAGA (8) 1.6 0.0016 P8 Cb GC TGAGAGTGCA (2) 1.6 0.0016 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma TGAGAGTGCA (2) 4.6 0.0046 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture TGTGTGTGTA (16) 4.6 0.0046 P8 GC+1d culture TTGGGGGAGT (5) 3.4 0.0034 P8 GC+1d culture GTGACAACTA (4) 1.1 0.0011 P8 GC+1d culture TGAGAGTGCA (2) 1.1 0.0011 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture TTGGGGGAGT (5) 2.3 0.0023 P8 GC+SHH+1d culture GCTCGGGAAG (5) 1.2 0.0012 P8 GC+SHH+1d culture GTGACAACTA (4) 1.2 0.0012 P8 GC+SHH+1d culture GTGGACCGGC (5) 1.2 0.0012 P8 GC+SHH+1d culture TGAGAGTGCA (2) 1.2 0.0012 P8 GC+SHH+1d culture TTCACATTTA (9) 1.2 0.0012 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 3T3 fibroblasts GTGGACCGGC (5) 3.5 0.0035 E15 cortex GCTCTGGAGA (8) 4.9 0.0049 E15 cortex TGTGTGTGTA (16) 4.9 0.0049 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 P1 cortex TTCACATTTA (9) 4.5 0.0045 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus GCTCGGGAAG (5) 1.8 0.0018 Hypothalamus TGAGAGTGCA (2) 1.8 0.0018 Hypothalamus TGTGTGTGTA (16) 1.8 0.0018 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina TTGGGGGAGT (5) 3.8 0.0038 E12.5 retina GCTCGGGAAG (5) 1.9 0.0019 E12.5 retina TGAGAGTGCA (2) 1.9 0.0019 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina GTGGACCGGC (5) 3.6 0.0036 E14.5 retina TTCACATTTA (9) 1.8 0.0018 E14.5 retina TTGGGGGAGT (5) 1.8 0.0018 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina GTGACAACTA (4) 1.8 0.0018 E16.5 retina GTGGACCGGC (5) 1.8 0.0018 E16.5 retina TGTGTGTGTA (16) 1.8 0.0018 E16.5 retina TTGGGGGAGT (5) 1.8 0.0018 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina GTGACAACTA (4) 1.8 0.0018 E18.5 retina GTGGACCGGC (5) 1.8 0.0018 E18.5 retina TTGGGGGAGT (5) 1.8 0.0018 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina TGTGTGTGTA (16) 7.9 0.0079 P0.5 retina TTGGGGGAGT (5) 3.9 0.0039 P0.5 retina AGCAGACACA (6) 2 0.002 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina TTGGGGGAGT (5) 3.5 0.0035 P2.5 retina AGCAGACACA (6) 1.8 0.0018 P2.5 retina GTGACAACTA (4) 1.8 0.0018 P2.5 retina TGAGAGTGCA (2) 1.8 0.0018 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina TGTGTGTGTA (16) 2 0.002 P4.5 retina TTGGGGGAGT (5) 2 0.002 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P6.5 retina TGTGTGTGTA (16) 5 0.005 P6.5 retina GTGGACCGGC (5) 3.3 0.0033 P6.5 retina GCTCTGGAGA (8) 1.7 0.0017 P6.5 retina TGAGAGTGCA (2) 1.7 0.0017 P6.5 retina TTGGGGGAGT (5) 1.7 0.0017 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina TGTGTGTGTA (16) 5.6 0.0056 P10.5 crx- retina GTGGACCGGC (5) 1.9 0.0019 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina AGCAGACACA (6) 1.9 0.0019 P10.5 crx+ retina TGAGAGTGCA (2) 1.9 0.0019 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 Adult retinal TGTGTGTGTA (16) 7.4 0.0074 Adult retinal TTGGGGGAGT (5) 3.7 0.0037 Adult retinal GCTCGGGAAG (5) 1.9 0.0019 Adult retinal TGAGAGTGCA (2) 1.9 0.0019 ONL TGTGTGTGTG (115) 23 0.023 ONL TGTGTGTGTA (16) 3.8 0.0038 ONL GTGGACCGGC (5) 1.9 0.0019