Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2115	Hnrpu	heterogeneous nuclear ribonucleoprotein U	1		51810
Gene Ontology	ribonucleoprotein complex | viral nucleocapsid
Human Homolog	HNRPU[heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 182 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATCTGGCTG ATACACTCCA CAGCTGAAAA (3) CAGTGTGAGA CTGTCCTCAA GAAGGACTAA (2) GAGTCAGCAT GCCGAGGGTA TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) TTCTCTGCCA (3) 53.7 0.0537 Cb medulloblastoma AATCTGGCTG AGAAAAACAA (2) ATACACTCCA CAAGCCAGTC CAGCTGAAAA (3) CAGTGTGAGA GAAGGACTAA (2) GACCACGATG GAGTCAGCAT GCCGAGGGTA TCAGTTCTTG TTATAAAAAA 36.8 0.0368 P8 GC+1d culture AATCTGGCTG AGAAAAACAA (2) ATACACTCCA CAGCTGAAAA (3) CCACAGAGAG GAAGGACTAA (2) GAGTCAGCAT TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) TTTATGAAAT 59.1 0.0591 P8 GC+SHH+1d culture AATCTGGCTG ATACACTCCA ATCCACTCCA CAGCTGAAAA (3) GAAGGACTAA (2) GAGTCAGCAT TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) TTATAAAAAA TTCTCTGCCA (3) 65.7 0.0657 3T3 fibroblasts AATCTGGCTG ACAACACAGG (4) GAGTCAGCAT GCCGAGGGTA TGATGTTGGA (3) 49 0.049 E15 cortex CAAGCCAGTC GAAGGACTAA (2) GAGTCAGCAT TCAGTTCTTG TTAGGTTCGG (3) 29.5 0.0295 P1 cortex ATACACTCCA CAAGCCAGTC TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) 22.5 0.0225 Hypothalamus AATCTGGCTG ACAACACAGG (4) AGAAAAACAA (2) CAGTGTGAGA CTGTCCTCAA GAAGGACTAA (2) GAGTCAGCAT TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) TTTATGAAAT 28.8 0.0288 E12.5 retina AATCTGGCTG CCACAGAGAG CTGTCCTCAA GAAGGACTAA (2) GAGTCAGCAT TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) TTTATGAAAT 60.2 0.0602 E14.5 retina ATACACTCCA GAAGGACTAA (2) GAGTCAGCAT GCTTCTGACC TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) 50.9 0.0509 E16.5 retina ATACACTCCA ATCCACTCCA CTGTCCTCAA GAAGGACTAA (2) GAGTCAGCAT GCTTCTGACC TAAAACAATA (3) TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) 54.2 0.0542 E18.5 retina ATACACTCCA CAGTGTGAGA GAGTCAGCAT GCTTCTGACC TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) 27.3 0.0273 P0.5 retina AATCTGGCTG ACAACACAGG (4) ATACACTCCA GAAGGACTAA (2) GAGCCCGGGA GAGTCAGCAT TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) 51.1 0.0511 P2.5 retina AATCTGGCTG ACAACACAGG (4) CAAGCCAGTC GAAGGACTAA (2) GAGTCAGCAT GCCGAGGGTA TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) TTATAAAAAA TTCTCTGCCA (3) 58.3 0.0583 P4.5 retina AATCTGGCTG ATACACTCCA ATCCACTCCA CCACAGAGAG GAGCCCGGGA GAGTCAGCAT TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) TTATAAAAAA TTCTCTGCCA (3) 41.8 0.0418 P6.5 retina AATCTGGCTG CAAGCCAGTC CAGCTGAAAA (3) CCACAGAGAG CTGTCCTCAA GAAGGACTAA (2) GAGTCAGCAT TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) TTCTCTGCCA (3) 43.5 0.0435 P10.5 crx- retina AATCTGGCTG ATACACTCCA GAGTCAGCAT TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) 63.2 0.0632 P10.5 crx+ retina AATCTGGCTG ATACACTCCA CAGCTGAAAA (3) CCACAGAGAG GAAGGACTAA (2) GACCACGATG GAGTCAGCAT GCTTCTGACC TCAGTTCTTG TTAGGTTCGG (3) 53.6 0.0536 Adult retinal AATCTGGCTG CAAGCCAGTC CTGTCCTCAA GAAGGACTAA (2) GACCACGATG GAGCCCGGGA GAGTCAGCAT TAAAACAATA (3) TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) 42.9 0.0429 ONL AATCTGGCTG ATACACTCCA CTGTCCTCAA GAGTCAGCAT TAAAACAATA (3) TCAGTTCTTG TGATGTTGGA (3) TTAGGTTCGG (3) 45.9 0.0459