| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGGATGTGC (2) AATTAAGGGG (2) CCCCCGCCAG
| 21.2 | 0.0212 |
| Cb medulloblastoma | AAGGATGTGC (2) GGTGCCCCCC
| 39.3 | 0.0393 |
| P8 GC+1d culture | AAGGATGTGC (2) AATTAAGGGG (2)
| 18.2 | 0.0182 |
| P8 GC+SHH+1d culture | AAGGATGTGC (2) AATTAAGGGG (2)
| 19.9 | 0.0199 |
| 3T3 fibroblasts | AAGGATGTGC (2) CCGCTCTTCC
| 28 | 0.028 |
| E15 cortex | AAGGATGTGC (2)
| 9.9 | 0.0099 |
| P1 cortex | AAGGATGTGC (2) CCGCTCTTCC
| 9 | 0.009 |
| Hypothalamus | AAGGATGTGC (2) TTTGCTGTGG
| 16.3 | 0.0163 |
| E12.5 retina | AAGGATGTGC (2)
| 9.4 | 0.0094 |
| E14.5 retina | AAGGATGTGC (2) AATTAAGGGG (2) AGGGCGATCC
| 18.2 | 0.0182 |
| E16.5 retina | AAGGATGTGC (2) AATTAAGGGG (2)
| 16.3 | 0.0163 |
| E18.5 retina | AAGGATGTGC (2) GGTGCCCCCC
| 9.1 | 0.0091 |
| P0.5 retina | AAGGATGTGC (2) AGGGCGATCC
| 11.8 | 0.0118 |
| P2.5 retina | AAGGATGTGC (2) AATTAAGGGG (2) CCCCCGCCAG
| 8.8 | 0.0088 |
| P4.5 retina | AAGGATGTGC (2) AGGGCGATCC
| 6 | 0.006 |
| P6.5 retina | AAGGATGTGC (2) AATTAAGGGG (2) GGTGCCCCCC
| 15.1 | 0.0151 |
| P10.5 crx- retina | AAGGATGTGC (2) AATTAAGGGG (2) TTTGCTGTGG
| 68.8 | 0.0688 |
| P10.5 crx+ retina | AAGGATGTGC (2)
| 13.5 | 0.0135 |
| Adult retinal | AAGGATGTGC (2) AGGGCGATCC CCGCTCTTCC
| 24.2 | 0.0242 |
| ONL | AAGGATGTGC (2)
| 7.7 | 0.0077 |