Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.212039	AF007011	EST AF007011			50736
Mm.212039	Pld1	phospholipase D1	3	3 10.5 cM	18805
Gene Ontology	catalytic activity | endoplasmic reticulum | Golgi apparatus | hydrolase activity | intracellular signaling cascade | lipid catabolism | membrane | metabolism
Human Homolog	PLD1[phospholipase D1, phophatidylcholine-specific]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAAAAAAAA (80) 13.1 0.0131 P8 Cb GC TATTTCAAAA (14) 3.3 0.0033 P8 Cb GC CACGCAGCCC (3) 1.6 0.0016 P8 Cb GC GGGGCTCACA (10) 1.6 0.0016 Cb medulloblastoma TTAAAAAAAA (80) 53.2 0.0532 Cb medulloblastoma AATAAACGTG (3) 4.6 0.0046 Cb medulloblastoma TATTTCAAAA (14) 4.6 0.0046 P8 GC+1d culture TTAAAAAAAA (80) 28.5 0.0285 P8 GC+1d culture AATAAACGTG (3) 2.3 0.0023 P8 GC+1d culture GGGGCTCACA (10) 2.3 0.0023 P8 GC+1d culture TATTTCAAAA (14) 2.3 0.0023 P8 GC+SHH+1d culture TTAAAAAAAA (80) 34 0.034 P8 GC+SHH+1d culture AATAAACGTG (3) 4.7 0.0047 P8 GC+SHH+1d culture TATTTCAAAA (14) 2.3 0.0023 E15 cortex GGGGCTCACA (10) 54.4 0.0544 E15 cortex TTAAAAAAAA (80) 4.9 0.0049 P1 cortex GGGGCTCACA (10) 13.6 0.0136 P1 cortex TTAAAAAAAA (80) 13.6 0.0136 P1 cortex AATAAACGTG (3) 4.5 0.0045 Hypothalamus GGGGCTCACA (10) 36.2 0.0362 Hypothalamus TTAAAAAAAA (80) 19.9 0.0199 Hypothalamus TATTTCAAAA (14) 3.6 0.0036 Hypothalamus CACGCAGCCC (3) 1.8 0.0018 E12.5 retina GGGGCTCACA (10) 35.7 0.0357 E12.5 retina TTAAAAAAAA (80) 11.3 0.0113 E12.5 retina AATAAACGTG (3) 1.9 0.0019 E14.5 retina GGGGCTCACA (10) 54.7 0.0547 E14.5 retina TTAAAAAAAA (80) 16.4 0.0164 E14.5 retina TATTTCAAAA (14) 5.5 0.0055 E14.5 retina AATAAACGTG (3) 1.8 0.0018 E16.5 retina GGGGCTCACA (10) 36.2 0.0362 E16.5 retina TTAAAAAAAA (80) 16.3 0.0163 E16.5 retina CACGCAGCCC (3) 3.6 0.0036 E16.5 retina TATTTCAAAA (14) 1.8 0.0018 E16.5 retina TCACTGAAAA (2) 1.8 0.0018 E18.5 retina GGGGCTCACA (10) 72.8 0.0728 E18.5 retina TTAAAAAAAA (80) 50.9 0.0509 E18.5 retina AATAAACGTG (3) 3.6 0.0036 E18.5 retina TATTTCAAAA (14) 1.8 0.0018 P0.5 retina GGGGCTCACA (10) 37.3 0.0373 P0.5 retina TTAAAAAAAA (80) 17.7 0.0177 P0.5 retina CACGCAGCCC (3) 2 0.002 P2.5 retina GGGGCTCACA (10) 65.1 0.0651 P2.5 retina TTAAAAAAAA (80) 40.5 0.0405 P2.5 retina TATTTCAAAA (14) 3.5 0.0035 P4.5 retina TTAAAAAAAA (80) 47.6 0.0476 P4.5 retina GGGGCTCACA (10) 27.7 0.0277 P4.5 retina CACGCAGCCC (3) 4 0.004 P4.5 retina AATAAACGTG (3) 2 0.002 P4.5 retina TATTTCAAAA (14) 2 0.002 P6.5 retina GGGGCTCACA (10) 43.4 0.0434 P6.5 retina TTAAAAAAAA (80) 16.7 0.0167 P6.5 retina TATTTCAAAA (14) 1.7 0.0017 P10.5 crx- retina GGGGCTCACA (10) 24.2 0.0242 P10.5 crx- retina TTAAAAAAAA (80) 13 0.013 P10.5 crx- retina AATAAACGTG (3) 5.6 0.0056 P10.5 crx- retina TCACTGAAAA (2) 1.9 0.0019 P10.5 crx+ retina GGGGCTCACA (10) 17.3 0.0173 P10.5 crx+ retina TTAAAAAAAA (80) 5.8 0.0058 P10.5 crx+ retina TATTTCAAAA (14) 1.9 0.0019 Adult retinal GGGGCTCACA (10) 31.5 0.0315 Adult retinal TTAAAAAAAA (80) 7.4 0.0074 Adult retinal TATTTCAAAA (14) 1.9 0.0019 Adult retinal TCACTGAAAA (2) 1.9 0.0019 ONL GGGGCTCACA (10) 38.3 0.0383 ONL TTAAAAAAAA (80) 7.7 0.0077 ONL TATTTCAAAA (14) 1.9 0.0019 ONL TCACTGAAAA (2) 1.9 0.0019