Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.212395
Rai14
retinoic acid induced 14
15
75646
Mm.212395
C81530
expressed sequence C81530
15
97978
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 73 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGGTGCTGG (
64
)
8.2
0.0082
P8 Cb GC
AATTGGGTCT
(
2
)
4.9
0.0049
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
TCGCAGCCAA
(
3
)
1.6
0.0016
Cb medulloblastoma
TGGGTGCTGG (
64
)
9.2
0.0092
Cb medulloblastoma
TCGCAGCCAA
(
3
)
4.6
0.0046
Cb medulloblastoma
AATTGGGTCT
(
2
)
2.3
0.0023
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
TCGCAGCCAA
(
3
)
10.3
0.0103
P8 GC+1d culture
TGGGTGCTGG (
64
)
5.7
0.0057
P8 GC+SHH+1d culture
TCGCAGCCAA
(
3
)
5.9
0.0059
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
TGGGTGCTGG (
64
)
3.5
0.0035
P8 GC+SHH+1d culture
AATTGGGTCT
(
2
)
1.2
0.0012
3T3 fibroblasts
TCGCAGCCAA
(
3
)
35
0.035
3T3 fibroblasts
TGGGTGCTGG (
64
)
17.5
0.0175
3T3 fibroblasts
AATTGGGTCT
(
2
)
7
0.007
E15 cortex
TGGGTGCTGG (
64
)
14.8
0.0148
E15 cortex
AACAGGATGA
(
6
)
4.9
0.0049
E15 cortex
GTGACACACG
(
2
)
4.9
0.0049
E15 cortex
TCGCAGCCAA
(
3
)
4.9
0.0049
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
AACAGGATGA
(
6
)
13.6
0.0136
P1 cortex
TGGGTGCTGG (
64
)
13.6
0.0136
P1 cortex
TCGCAGCCAA
(
3
)
4.5
0.0045
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
TGGGTGCTGG (
64
)
9.1
0.0091
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
TCGCAGCCAA
(
3
)
3.6
0.0036
E12.5 retina
AATTGGGTCT
(
2
)
11.3
0.0113
E12.5 retina
TGGGTGCTGG (
64
)
9.4
0.0094
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E14.5 retina
TGGGTGCTGG (
64
)
54.7
0.0547
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E14.5 retina
TCGCAGCCAA
(
3
)
1.8
0.0018
E16.5 retina
TGGGTGCTGG (
64
)
41.7
0.0417
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
AATTGGGTCT
(
2
)
1.8
0.0018
E16.5 retina
TCGCAGCCAA
(
3
)
1.8
0.0018
E18.5 retina
TGGGTGCTGG (
64
)
20
0.02
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
P0.5 retina
TCGCAGCCAA
(
3
)
11.8
0.0118
P0.5 retina
TGGGTGCTGG (
64
)
11.8
0.0118
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
AATTGGGTCT
(
2
)
2
0.002
P2.5 retina
TGGGTGCTGG (
64
)
17.6
0.0176
P2.5 retina
TCGCAGCCAA
(
3
)
8.8
0.0088
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P4.5 retina
TGGGTGCTGG (
64
)
9.9
0.0099
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
AATTGGGTCT
(
2
)
2
0.002
P4.5 retina
GTGACACACG
(
2
)
2
0.002
P6.5 retina
TGGGTGCTGG (
64
)
13.3
0.0133
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
TCGCAGCCAA
(
3
)
5
0.005
P6.5 retina
AATTGGGTCT
(
2
)
1.7
0.0017
P10.5 crx- retina
TGGGTGCTGG (
64
)
20.4
0.0204
P10.5 crx- retina
TCGCAGCCAA
(
3
)
7.4
0.0074
P10.5 crx- retina
TCTGTGGTAG (
6
)
3.7
0.0037
P10.5 crx+ retina
TCGCAGCCAA
(
3
)
23.1
0.0231
P10.5 crx+ retina
TGGGTGCTGG (
64
)
15.4
0.0154
P10.5 crx+ retina
TCTGTGGTAG (
6
)
3.8
0.0038
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
Adult retinal
TGGGTGCTGG (
64
)
13
0.013
Adult retinal
TCGCAGCCAA
(
3
)
11.1
0.0111
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
TCTGTGGTAG (
6
)
1.9
0.0019
ONL
TGGGTGCTGG (
64
)
40.2
0.0402
ONL
TCGCAGCCAA
(
3
)
5.7
0.0057
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
ONL
GTGACACACG
(
2
)
1.9
0.0019
ONL
TCTGTGGTAG (
6
)
1.9
0.0019
