| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAATATGCTC (2) GTTTTTATCC (2)
| 4.9 | 0.0049 |
| Cb medulloblastoma | TGAGTGTGTG (2)
| 2.3 | 0.0023 |
| P8 GC+1d culture | CGTGGTGTGA (2) GAATATGCTC (2)
| 2.2 | 0.0022 |
| P8 GC+SHH+1d culture | CGTGGTGTGA (2) CTCAAGATCA (2) GAATATGCTC (2)
| 3.6 | 0.0036 |
| 3T3 fibroblasts | CGTGGTGTGA (2) CTCAAGATCA (2)
| 7 | 0.007 |
| E15 cortex | CGTGGTGTGA (2) CTCAAGATCA (2)
| 9.8 | 0.0098 |
| Hypothalamus | CTCAAGATCA (2)
| 1.8 | 0.0018 |
| E12.5 retina | CTCAAGATCA (2) GTTTTTAATC TGAGTGTGTG (2)
| 5.7 | 0.0057 |
| E14.5 retina | TGAGTGTGTG (2)
| 1.8 | 0.0018 |
| E16.5 retina | CGTGGTGTGA (2) GTTTTTAATC
| 3.6 | 0.0036 |
| E18.5 retina | CTCAAGATCA (2)
| 5.5 | 0.0055 |
| P0.5 retina | CTCAAGATCA (2) GAATATGCTC (2) GTTTTTATCC (2)
| 9.9 | 0.0099 |
| P2.5 retina | GAATATGCTC (2)
| 3.5 | 0.0035 |
| P4.5 retina | GAATATGCTC (2)
| 2 | 0.002 |
| P6.5 retina | CTCAAGATCA (2)
| 1.7 | 0.0017 |
| P10.5 crx- retina | GAATATGCTC (2) TGAGTGTGTG (2)
| 3.8 | 0.0038 |
| P10.5 crx+ retina | CTCAAGATCA (2) TGAGTGTGTG (2)
| 3.8 | 0.0038 |
| Adult retinal | CTCAAGATCA (2) GTTTTTAATC
| 3.8 | 0.0038 |
| ONL | CTCAAGATCA (2)
| 5.7 | 0.0057 |