Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21281	A830049F12Rik	RIKEN cDNA A830049F12 gene	5		319915
Mm.21281	Rnf4	ring finger protein 4	5		19822
Gene Ontology	nucleus | protein ubiquitination | regulation of transcription, DNA-dependent | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	RNF4[ring finger protein 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTATCAGTC (2) 24.5 0.0245 P8 Cb GC GTATCTGCCT (2) 4.9 0.0049 P8 Cb GC TAGAAAAAAA (3) 3.3 0.0033 P8 Cb GC AGCATAGTTT (2) 1.6 0.0016 P8 Cb GC TTGGCCAAGT (3) 1.6 0.0016 Cb medulloblastoma GGTATCAGTC (2) 13.9 0.0139 Cb medulloblastoma CTTTCCAAAT (3) 4.6 0.0046 Cb medulloblastoma TAGAAAAAAA (3) 2.3 0.0023 P8 GC+1d culture GGTATCAGTC (2) 8 0.008 P8 GC+1d culture TAGAAAAAAA (3) 5.7 0.0057 P8 GC+1d culture AGCATAGTTT (2) 1.1 0.0011 P8 GC+SHH+1d culture GGTATCAGTC (2) 14.1 0.0141 P8 GC+SHH+1d culture TAGAAAAAAA (3) 3.5 0.0035 P8 GC+SHH+1d culture AGCATAGTTT (2) 1.2 0.0012 3T3 fibroblasts GGTATCAGTC (2) 14 0.014 E15 cortex GGTATCAGTC (2) 24.7 0.0247 Hypothalamus GGTATCAGTC (2) 5.4 0.0054 Hypothalamus TAGAAAAAAA (3) 3.6 0.0036 Hypothalamus AGCATAGTTT (2) 1.8 0.0018 Hypothalamus CAGCCAGTTC (3) 1.8 0.0018 E12.5 retina GGTATCAGTC (2) 24.4 0.0244 E12.5 retina CTTTCCAAAT (3) 1.9 0.0019 E14.5 retina GGTATCAGTC (2) 5.5 0.0055 E14.5 retina TAGAAAAAAA (3) 1.8 0.0018 E14.5 retina TTGGCCAAGT (3) 1.8 0.0018 E16.5 retina GGTATCAGTC (2) 12.7 0.0127 E16.5 retina AGCATAGTTT (2) 1.8 0.0018 E16.5 retina CAGCCAGTTC (3) 1.8 0.0018 E18.5 retina GGTATCAGTC (2) 18.2 0.0182 E18.5 retina AGCATAGTTT (2) 3.6 0.0036 P0.5 retina GGTATCAGTC (2) 17.7 0.0177 P0.5 retina CTTTCCAAAT (3) 2 0.002 P0.5 retina TAGAAAAAAA (3) 2 0.002 P2.5 retina GGTATCAGTC (2) 15.8 0.0158 P2.5 retina AGCATAGTTT (2) 1.8 0.0018 P4.5 retina GGTATCAGTC (2) 9.9 0.0099 P4.5 retina TTGGCCAAGT (3) 2 0.002 P6.5 retina GGTATCAGTC (2) 18.3 0.0183 P6.5 retina AGCATAGTTT (2) 1.7 0.0017 P10.5 crx- retina GGTATCAGTC (2) 7.4 0.0074 P10.5 crx- retina CAGCCAGTTC (3) 1.9 0.0019 P10.5 crx- retina TAGAAAAAAA (3) 1.9 0.0019 P10.5 crx+ retina GGTATCAGTC (2) 15.4 0.0154 P10.5 crx+ retina AGCATAGTTT (2) 3.8 0.0038 P10.5 crx+ retina CAGCCAGTTC (3) 1.9 0.0019 Adult retinal GGTATCAGTC (2) 7.4 0.0074 ONL GGTATCAGTC (2) 5.7 0.0057 ONL TAGAAAAAAA (3) 1.9 0.0019