Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.212861	Cul4a	cullin 4A	8		99375
Gene Ontology	cell cycle
Human Homolog	CUL4A[cullin 4A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 108 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGACTCAGA (4) 6.5 0.0065 P8 Cb GC TTTAAGATAC (3) 4.9 0.0049 P8 Cb GC AAAACTCAAA (5) 3.3 0.0033 P8 Cb GC CTGGTTGGAG (2) 3.3 0.0033 P8 Cb GC CTACTTTGTA (3) 1.6 0.0016 P8 Cb GC GAAGGAGTTA (7) 1.6 0.0016 P8 Cb GC TGTGTTCCTG (4) 1.6 0.0016 P8 Cb GC TTCAGGTTGA (3) 1.6 0.0016 Cb medulloblastoma TTTAAGATAC (3) 6.9 0.0069 Cb medulloblastoma AAAACTCAAA (5) 2.3 0.0023 Cb medulloblastoma ATCAAAATTC 2.3 0.0023 P8 GC+1d culture GGCTACTGGC (4) 4.6 0.0046 P8 GC+1d culture AAAACTCAAA (5) 2.3 0.0023 P8 GC+1d culture GCCAGCTGCA (2) 2.3 0.0023 P8 GC+1d culture TATAAGTGTT (6) 1.1 0.0011 P8 GC+1d culture TTTAAGATAC (3) 1.1 0.0011 P8 GC+SHH+1d culture TTTAAGATAC (3) 7 0.007 P8 GC+SHH+1d culture AAAACTCAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture CTGGTTGGAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GAAGGAGTTA (7) 1.2 0.0012 P8 GC+SHH+1d culture GCCAGCTGCA (2) 1.2 0.0012 P8 GC+SHH+1d culture TTCAGGTTGA (3) 1.2 0.0012 3T3 fibroblasts AAGACTCAGA (4) 24.5 0.0245 3T3 fibroblasts CTGGTTGGAG (2) 14 0.014 E15 cortex GAAGGAGTTA (7) 24.7 0.0247 E15 cortex AAGACTCAGA (4) 19.8 0.0198 E15 cortex CTGGTTGGAG (2) 4.9 0.0049 E15 cortex GGCTACTGGC (4) 4.9 0.0049 E15 cortex TTCAGGTTGA (3) 4.9 0.0049 E15 cortex TTTAAGATAC (3) 4.9 0.0049 P1 cortex GAAGGAGTTA (7) 9.1 0.0091 P1 cortex ATCAAAATTC 4.5 0.0045 P1 cortex GATGTCTCAA (5) 4.5 0.0045 Hypothalamus GAAGGAGTTA (7) 3.6 0.0036 Hypothalamus GCCAGCTGCA (2) 3.6 0.0036 Hypothalamus TATAAGTGTT (6) 1.8 0.0018 Hypothalamus TTTAAGATAC (3) 1.8 0.0018 E12.5 retina CTGGTTGGAG (2) 15 0.015 E12.5 retina GAAGGAGTTA (7) 5.6 0.0056 E12.5 retina TTCAGGTTGA (3) 1.9 0.0019 E12.5 retina TTTAAGATAC (3) 1.9 0.0019 E14.5 retina GAAGGAGTTA (7) 56.5 0.0565 E14.5 retina CTGGTTGGAG (2) 7.3 0.0073 E14.5 retina AAAACTCAAA (5) 3.6 0.0036 E14.5 retina GCCAGCTGCA (2) 3.6 0.0036 E14.5 retina GGCTACTGGC (4) 3.6 0.0036 E14.5 retina TTTAAGATAC (3) 3.6 0.0036 E14.5 retina TTTCATTTTG 3.6 0.0036 E14.5 retina CTACTTTGTA (3) 1.8 0.0018 E14.5 retina TGTGTTCCTG (4) 1.8 0.0018 E16.5 retina GAAGGAGTTA (7) 9.1 0.0091 E16.5 retina AAAACTCAAA (5) 1.8 0.0018 E16.5 retina CTACTTTGTA (3) 1.8 0.0018 E16.5 retina CTGGTTGGAG (2) 1.8 0.0018 E16.5 retina GCCAGCTGCA (2) 1.8 0.0018 E16.5 retina TTCAGGTTGA (3) 1.8 0.0018 E16.5 retina TTTCATTTTG 1.8 0.0018 E18.5 retina CTGGTTGGAG (2) 5.5 0.0055 E18.5 retina AAAACTCAAA (5) 3.6 0.0036 E18.5 retina GATGTCTCAA (5) 1.8 0.0018 E18.5 retina TGTGTTCCTG (4) 1.8 0.0018 E18.5 retina TTTAAGATAC (3) 1.8 0.0018 E18.5 retina TTTCATTTTG 1.8 0.0018 P0.5 retina CTGGTTGGAG (2) 9.8 0.0098 P0.5 retina GAAGGAGTTA (7) 7.9 0.0079 P0.5 retina TTTAAGATAC (3) 3.9 0.0039 P0.5 retina AAAACTCAAA (5) 2 0.002 P0.5 retina GGCTACTGGC (4) 2 0.002 P2.5 retina CTGGTTGGAG (2) 7 0.007 P2.5 retina GAAGGAGTTA (7) 5.3 0.0053 P2.5 retina AAAACTCAAA (5) 1.8 0.0018 P2.5 retina GATGTCTCAA (5) 1.8 0.0018 P2.5 retina GGCTACTGGC (4) 1.8 0.0018 P2.5 retina TTCAGGTTGA (3) 1.8 0.0018 P2.5 retina TTTAAGATAC (3) 1.8 0.0018 P4.5 retina GAAGGAGTTA (7) 5.9 0.0059 P4.5 retina TTTAAGATAC (3) 4 0.004 P4.5 retina AAAACTCAAA (5) 2 0.002 P4.5 retina GCCAGCTGCA (2) 2 0.002 P4.5 retina TATAAGTGTT (6) 2 0.002 P6.5 retina GAAGGAGTTA (7) 6.7 0.0067 P6.5 retina CTGGTTGGAG (2) 5 0.005 P6.5 retina TTTAAGATAC (3) 5 0.005 P6.5 retina AAAACTCAAA (5) 3.3 0.0033 P6.5 retina GATGTCTCAA (5) 1.7 0.0017 P6.5 retina GGCTACTGGC (4) 1.7 0.0017 P6.5 retina TTTCATTTTG 1.7 0.0017 P10.5 crx- retina GAAGGAGTTA (7) 9.3 0.0093 P10.5 crx- retina TTTAAGATAC (3) 5.6 0.0056 P10.5 crx- retina CTGGTTGGAG (2) 3.7 0.0037 P10.5 crx- retina TTCAGGTTGA (3) 3.7 0.0037 P10.5 crx- retina AAGACTCAGA (4) 1.9 0.0019 P10.5 crx+ retina AAAACTCAAA (5) 3.8 0.0038 P10.5 crx+ retina GAAGGAGTTA (7) 3.8 0.0038 P10.5 crx+ retina GCCAGCTGCA (2) 3.8 0.0038 P10.5 crx+ retina CTGGTTGGAG (2) 1.9 0.0019 P10.5 crx+ retina GGCTACTGGC (4) 1.9 0.0019 P10.5 crx+ retina TTTAAGATAC (3) 1.9 0.0019 Adult retinal GAAGGAGTTA (7) 18.5 0.0185 Adult retinal CTGGTTGGAG (2) 13 0.013 Adult retinal GGCTACTGGC (4) 1.9 0.0019 Adult retinal TGTGTTCCTG (4) 1.9 0.0019 Adult retinal TTTAAGATAC (3) 1.9 0.0019 ONL GAAGGAGTTA (7) 38.3 0.0383 ONL CTGGTTGGAG (2) 5.7 0.0057 ONL ATCAAAATTC 1.9 0.0019 ONL TATAAGTGTT (6) 1.9 0.0019 ONL TTTAAGATAC (3) 1.9 0.0019