Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.213000	Pkn1	protein kinase N1	8	8 38.0 cM	320795
Gene Ontology	ATP binding | cytoplasm | cytoplasmic vesicle | hyperosmotic response | intracellular | kinase activity | peptidase activity | protein kinase activity | protein serine/threonine kinase activity | protein targeting | signal transduction | transferase activity
Human Homolog	PKN1[protein kinase N1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 18 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAACCCCAGG (2) 4.9 0.0049 P8 Cb GC CAGCTTCGAA (3) 1.6 0.0016 Cb medulloblastoma CAGCTTCGAA (3) 4.6 0.0046 P8 GC+1d culture AGAAGGCTAC 1.1 0.0011 P8 GC+SHH+1d culture CAGCTTCGAA (3) 2.3 0.0023 3T3 fibroblasts CAGCTTCGAA (3) 3.5 0.0035 P1 cortex CAGCTTCGAA (3) 4.5 0.0045 Hypothalamus CAGCTTCGAA (3) 1.8 0.0018 E12.5 retina AGAAGGCTAC 3.8 0.0038 E12.5 retina CAGCTTCGAA (3) 1.9 0.0019 E14.5 retina CAGCTTCGAA (3) 1.8 0.0018 E18.5 retina CAGCTTCGAA (3) 1.8 0.0018 P0.5 retina CAGCTTCGAA (3) 2 0.002 P2.5 retina CAGCTTCGAA (3) 1.8 0.0018 P6.5 retina CAGCTTCGAA (3) 1.7 0.0017 P10.5 crx- retina CAGCTTCGAA (3) 3.7 0.0037 P10.5 crx+ retina CAGCTTCGAA (3) 3.8 0.0038 Adult retinal CAGCTTCGAA (3) 1.9 0.0019