Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.213943
2700038C09Rik
RIKEN cDNA 2700038C09 gene
2
66496
Mm.213943
C330003G01Rik
RIKEN cDNA C330003G01 gene
2
320694
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 26 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGCAGCAGC
(
2
)
GCAGCCATCC
(
2
)
8.2
0.0082
Cb medulloblastoma
AAGCAGCAGC
(
2
)
9.2
0.0092
P8 GC+1d culture
AAGCAGCAGC
(
2
)
GGCATCTCCA
(
2
)
11.4
0.0114
P8 GC+SHH+1d culture
AAGCAGCAGC
(
2
)
GCAGCCATCC
(
2
)
9.4
0.0094
3T3 fibroblasts
AAGCAGCAGC
(
2
)
14
0.014
E15 cortex
AAGCAGCAGC
(
2
)
29.7
0.0297
P1 cortex
AAGCAGCAGC
(
2
)
GCAGCCATCC
(
2
)
22.7
0.0227
Hypothalamus
AAGCAGCAGC
(
2
)
5.4
0.0054
E12.5 retina
AAGCAGCAGC
(
2
)
15
0.015
E14.5 retina
AAGCAGCAGC
(
2
)
GCAGCCATCC
(
2
)
3.6
0.0036
E16.5 retina
AAGCAGCAGC
(
2
)
GGCATCTCCA
(
2
)
14.5
0.0145
E18.5 retina
AAGCAGCAGC
(
2
)
5.5
0.0055
P0.5 retina
AAGCAGCAGC
(
2
)
11.8
0.0118
P2.5 retina
AAGCAGCAGC
(
2
)
15.8
0.0158
P6.5 retina
AAGCAGCAGC
(
2
)
5
0.005
P10.5 crx- retina
AAGCAGCAGC
(
2
)
20.4
0.0204
P10.5 crx+ retina
AAGCAGCAGC
(
2
)
5.8
0.0058
Adult retinal
AAGCAGCAGC
(
2
)
GGCATCTCCA
(
2
)
9.3
0.0093
ONL
AAGCAGCAGC
(
2
)
1.9
0.0019
