Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.213991
Snx13
sorting nexin 13
12
217463
Human Homolog
SNX13[sorting nexin 13]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 28 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTAGGTAA
GCTCCTGTAT
(
2
)
3.2
0.0032
Cb medulloblastoma
GCTCCTGTAT
(
2
)
2.3
0.0023
P8 GC+1d culture
CCTTAGGTAA
GCTCCTGTAT
(
2
)
TGAAAATAAA (
3
)
5.7
0.0057
P8 GC+SHH+1d culture
GCTCCTGTAT
(
2
)
1.2
0.0012
E15 cortex
CAGTTGCTGG (
3
)
GCTCCTGTAT
(
2
)
9.8
0.0098
Hypothalamus
CAGTTGCTGG (
3
)
TCTGAAAACA
TGAAAATAAA (
3
)
5.4
0.0054
E12.5 retina
TCTGAAAACA
1.9
0.0019
E16.5 retina
CAGTTGCTGG (
3
)
GCTCCTGTAT
(
2
)
3.6
0.0036
E18.5 retina
TCTGAAAACA
TGAAAATAAA (
3
)
3.6
0.0036
P0.5 retina
TGGTAGCTCT
2
0.002
P4.5 retina
GCTCCTGTAT
(
2
)
2
0.002
P6.5 retina
CAGTTGCTGG (
3
)
1.7
0.0017
P10.5 crx- retina
CAGTTGCTGG (
3
)
TCTGAAAACA
TGAAAATAAA (
3
)
5.7
0.0057
P10.5 crx+ retina
GCTCCTGTAT
(
2
)
TGAAAATAAA (
3
)
TGGTAGCTCT
5.7
0.0057
ONL
CCTTAGGTAA
TGGTAGCTCT
5.7
0.0057
