Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.214946	Zdhhc6	zinc finger, DHHC domain containing 6	19		66980
Gene Ontology	integral to membrane | metal ion binding
Human Homolog	ZDHHC6[zinc finger, DHHC domain containing 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTACTCT (4) 17.9 0.0179 P8 Cb GC ATTCTTTATA (4) 4.9 0.0049 Cb medulloblastoma TGGTTACTCT (4) 20.8 0.0208 Cb medulloblastoma ATTCTTTATA (4) 6.9 0.0069 Cb medulloblastoma TGCCTTTGAA (3) 4.6 0.0046 P8 GC+1d culture TGGTTACTCT (4) 20.5 0.0205 P8 GC+1d culture ATTCTTTATA (4) 16 0.016 P8 GC+1d culture GCCTTGTTGC (3) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTACTCT (4) 18.7 0.0187 P8 GC+SHH+1d culture ACTTCAGAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture ATTCTTTATA (4) 1.2 0.0012 P8 GC+SHH+1d culture GAACACAAGG (2) 1.2 0.0012 3T3 fibroblasts TGGTTACTCT (4) 3.5 0.0035 E15 cortex TGGTTACTCT (4) 4.9 0.0049 P1 cortex ATTCTTTATA (4) 9.1 0.0091 P1 cortex TGGTTACTCT (4) 4.5 0.0045 Hypothalamus TGGTTACTCT (4) 16.3 0.0163 E12.5 retina TGGTTACTCT (4) 16.9 0.0169 E12.5 retina ATTCTTTATA (4) 5.6 0.0056 E14.5 retina TGGTTACTCT (4) 16.4 0.0164 E14.5 retina ATTCTTTATA (4) 14.6 0.0146 E14.5 retina ACTTCAGAAA (5) 1.8 0.0018 E16.5 retina ATTCTTTATA (4) 14.5 0.0145 E16.5 retina TGGTTACTCT (4) 10.9 0.0109 E18.5 retina TGGTTACTCT (4) 29.1 0.0291 E18.5 retina ATTCTTTATA (4) 1.8 0.0018 P0.5 retina TGGTTACTCT (4) 13.7 0.0137 P0.5 retina ATTCTTTATA (4) 2 0.002 P2.5 retina TGGTTACTCT (4) 19.4 0.0194 P2.5 retina ATTCTTTATA (4) 7 0.007 P4.5 retina TGGTTACTCT (4) 35.7 0.0357 P4.5 retina ATTCTTTATA (4) 2 0.002 P6.5 retina TGGTTACTCT (4) 11.7 0.0117 P6.5 retina ACTTCAGAAA (5) 1.7 0.0017 P6.5 retina GAACACAAGG (2) 1.7 0.0017 P6.5 retina GCCTTGTTGC (3) 1.7 0.0017 P6.5 retina TGCCTTTGAA (3) 1.7 0.0017 P10.5 crx- retina TGGTTACTCT (4) 9.3 0.0093 P10.5 crx- retina ATTCTTTATA (4) 7.4 0.0074 P10.5 crx- retina GCCTTGTTGC (3) 1.9 0.0019 P10.5 crx+ retina TGGTTACTCT (4) 19.2 0.0192 P10.5 crx+ retina GCCTTGTTGC (3) 1.9 0.0019 Adult retinal TGGTTACTCT (4) 5.6 0.0056 Adult retinal ATTCTTTATA (4) 1.9 0.0019 Adult retinal TGCCTTTGAA (3) 1.9 0.0019 ONL TGGTTACTCT (4) 5.7 0.0057 ONL ATTCTTTATA (4) 1.9 0.0019 ONL GAACACAAGG (2) 1.9 0.0019 ONL TGCCTTTGAA (3) 1.9 0.0019