Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.215115	Polr3h	polymerase (RNA) III (DNA directed) polypeptide H	15		78929
Gene Ontology	citrate metabolism | DNA-directed RNA polymerase activity | iron ion binding | mitochondrion | nucleic acid binding | nucleus | transcription | transferase activity | tricarboxylic acid cycle
Human Homolog	POLR3H[polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CAACTGTATT (2) 9.8 0.0098 P8 Cb GC GGACCCGGAA (7) 4.9 0.0049 P8 Cb GC TTAGGTGGGT (2) 3.3 0.0033 P8 Cb GC GGCTGCTCAA 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CAACTGTATT (2) 9.2 0.0092 Cb medulloblastoma GGCTGCTCAA 4.6 0.0046 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CAACTGTATT (2) 16 0.016 P8 GC+1d culture TTAGGTGGGT (2) 5.7 0.0057 P8 GC+1d culture GGACCCGGAA (7) 2.3 0.0023 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CAACTGTATT (2) 10.5 0.0105 P8 GC+SHH+1d culture TTAGGTGGGT (2) 4.7 0.0047 P8 GC+SHH+1d culture GGACCCGGAA (7) 3.5 0.0035 P8 GC+SHH+1d culture GGCTGCTCAA 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GACACTGGGG (4) 3.5 0.0035 3T3 fibroblasts GGACCCGGAA (7) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GACACTGGGG (4) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CAACTGTATT (2) 13.6 0.0136 P1 cortex TTAGGTGGGT (2) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CAACTGTATT (2) 18.1 0.0181 Hypothalamus GGCTGCTCAA 3.6 0.0036 Hypothalamus TTAGGTGGGT (2) 3.6 0.0036 Hypothalamus GACACTGGGG (4) 1.8 0.0018 Hypothalamus GGACCCGGAA (7) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CAACTGTATT (2) 9.4 0.0094 E12.5 retina GGACCCGGAA (7) 5.6 0.0056 E12.5 retina TTAGGTGGGT (2) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina CAACTGTATT (2) 9.1 0.0091 E14.5 retina GGACCCGGAA (7) 7.3 0.0073 E14.5 retina TTAGGTGGGT (2) 3.6 0.0036 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GGACCCGGAA (7) 12.7 0.0127 E16.5 retina TTAGGTGGGT (2) 7.2 0.0072 E16.5 retina CAACTGTATT (2) 3.6 0.0036 E16.5 retina GGCTGCTCAA 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina GGACCCGGAA (7) 10.9 0.0109 E18.5 retina CAACTGTATT (2) 7.3 0.0073 E18.5 retina TTAGGTGGGT (2) 5.5 0.0055 E18.5 retina GGCTGCTCAA 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina CAACTGTATT (2) 15.7 0.0157 P0.5 retina GGACCCGGAA (7) 3.9 0.0039 P0.5 retina TTAGGTGGGT (2) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GGACCCGGAA (7) 8.8 0.0088 P2.5 retina CAACTGTATT (2) 5.3 0.0053 P2.5 retina GACACTGGGG (4) 1.8 0.0018 P2.5 retina TTAGGTGGGT (2) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CAACTGTATT (2) 9.9 0.0099 P4.5 retina TTAGGTGGGT (2) 5.9 0.0059 P4.5 retina GGACCCGGAA (7) 2 0.002 P4.5 retina GGCTGCTCAA 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina TTAGGTGGGT (2) 11.7 0.0117 P6.5 retina CAACTGTATT (2) 10 0.01 P6.5 retina GGACCCGGAA (7) 5 0.005 P6.5 retina GGCTGCTCAA 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina TTAGGTGGGT (2) 9.3 0.0093 P10.5 crx- retina CAACTGTATT (2) 7.4 0.0074 P10.5 crx- retina GGACCCGGAA (7) 5.6 0.0056 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GGACCCGGAA (7) 13.5 0.0135 P10.5 crx+ retina CAACTGTATT (2) 9.6 0.0096 P10.5 crx+ retina GGCTGCTCAA 3.8 0.0038 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CAACTGTATT (2) 5.6 0.0056 Adult retinal GGACCCGGAA (7) 3.7 0.0037 Adult retinal GGCTGCTCAA 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL CAACTGTATT (2) 15.3 0.0153 ONL TTAGGTGGGT (2) 1.9 0.0019