Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.215122	Caskin2	cask-interacting protein 2	11		140721
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	CASKIN2[CASK interacting protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AGAAGCAAAG (4) 1.6 0.0016 P8 Cb GC CCCCTGCCTG (3) 1.6 0.0016 P8 Cb GC TGGAATGACT (3) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GAGAAGCCTG (8) 4.6 0.0046 Cb medulloblastoma AGAAGCAAAG (4) 2.3 0.0023 Cb medulloblastoma CCTTCCTGCC (3) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GAGAAGCCTG (8) 1.1 0.0011 P8 GC+1d culture GATCCACCAC (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GAGAAGCCTG (8) 2.3 0.0023 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GAGAAGCCTG (8) 7 0.007 3T3 fibroblasts GCAGGGGGTG (5) 3.5 0.0035 3T3 fibroblasts TGGAATGACT (3) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GCAGGGGGTG (5) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AGAAGCAAAG (4) 4.5 0.0045 P1 cortex CCTTCCTGCC (3) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GAGAAGCCTG (8) 1.8 0.0018 Hypothalamus GATCCACCAC (2) 1.8 0.0018 Hypothalamus TGGAATGACT (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina GAGAAGCCTG (8) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GCCCTTCCCA (6) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CCCCTGCCTG (3) 1.8 0.0018 E16.5 retina GAGAAGCCTG (8) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CCTTCCTGCC (3) 1.8 0.0018 E18.5 retina GAGAAGCCTG (8) 1.8 0.0018 E18.5 retina GCCCTTCCCA (6) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GCAGGGGGTG (5) 2 0.002 P0.5 retina GCCCTTCCCA (6) 2 0.002 P0.5 retina TGGAATGACT (3) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CCCCTGCTGC (8) 3.5 0.0035 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CCTTCCTGCC (3) 4 0.004 P4.5 retina CCCCTGCTGC (8) 2 0.002 P4.5 retina GATCCACCAC (2) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TGGAATGACT (3) 3.3 0.0033 P6.5 retina GAGAAGCCTG (8) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GAGAAGCCTG (8) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GAGAAGCCTG (8) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GAGAAGCCTG (8) 1.9 0.0019 Adult retinal GATCCACCAC (2) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCCCTGCCTG (3) 1.9 0.0019