Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21596	AA589488	EST AA589488	6		57889
Mm.21596	9430088B20Rik	RIKEN cDNA 9430088B20 gene	6		320955
Mm.21596	Edem1	ER degradation enhancer, mannosidase alpha-like 1	6		192193
Gene Ontology	alpha-mannosidase activity | calcium ion binding | endoplasmic reticulum | ER-associated protein catabolism | integral to endoplasmic reticulum membrane | integral to membrane | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | membrane | N-linked glycosylation | response to unfolded protein
Human Homolog	EDEM1[ER degradation enhancer, mannosidase alpha-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 26 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCCAGATCG (3) 1.6 0.0016 P8 Cb GC TAGATGCTCT (4) 1.6 0.0016 Cb medulloblastoma TAGGGAATGG (4) 6.9 0.0069 P8 GC+1d culture TAGGGAATGG (4) 6.8 0.0068 P8 GC+1d culture CGCCAGATCG (3) 2.3 0.0023 P8 GC+1d culture TAGATGCTCT (4) 2.3 0.0023 P8 GC+1d culture CACAGGCCTG (8) 1.1 0.0011 P8 GC+1d culture TTTAATCTGT (3) 1.1 0.0011 P8 GC+SHH+1d culture TAGGGAATGG (4) 9.4 0.0094 P8 GC+SHH+1d culture TAGATGCTCT (4) 7 0.007 P8 GC+SHH+1d culture CACAGGCCTG (8) 1.2 0.0012 P8 GC+SHH+1d culture CGCCAGATCG (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTAATCTGT (3) 1.2 0.0012 E15 cortex CGCCAGATCG (3) 4.9 0.0049 Hypothalamus TAGGGAATGG (4) 3.6 0.0036 E12.5 retina CACAGGCCTG (8) 1.9 0.0019 E14.5 retina TTTAATCTGT (3) 1.8 0.0018 E16.5 retina CACAGGCCTG (8) 1.8 0.0018 E16.5 retina TTTAATCTGT (3) 1.8 0.0018 E18.5 retina TTTAATCTGT (3) 1.8 0.0018 P0.5 retina CACAGGCCTG (8) 2 0.002 P0.5 retina TTTAATCTGT (3) 2 0.002 P10.5 crx- retina CACAGGCCTG (8) 3.7 0.0037 Adult retinal CACAGGCCTG (8) 7.4 0.0074 Adult retinal TAGGGAATGG (4) 7.4 0.0074 ONL TAAATGCTCT (9) 7.7 0.0077