| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TACAATCAGA TTGGAATCCA TTTGGTTTGG (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | TACAGTATTT (2) TTTGGTTTGG (2)
| 6.9 | 0.0069 |
| P8 GC+1d culture | TACAGTATTT (2) TTGGAATCCA TTTGGTTTGG (2)
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | TACAATCAGA TTGGAATCCA TTTGGTTTGG (2)
| 4.7 | 0.0047 |
| P1 cortex | TACAATCAGA
| 13.6 | 0.0136 |
| Hypothalamus | TACAATCAGA TACAGTATTT (2) TTGGAATCCA TTTGGTTTGG (2)
| 18 | 0.018 |
| E14.5 retina | TACAGTATTT (2) TTTGGTTTGG (2)
| 5.4 | 0.0054 |
| E16.5 retina | TTTGGTTTGG (2)
| 1.8 | 0.0018 |
| E18.5 retina | TACAGTATTT (2)
| 1.8 | 0.0018 |
| P0.5 retina | TACAATCAGA TACAGTATTT (2) TCTCCATCCT
| 9.9 | 0.0099 |
| P2.5 retina | TACAGTATTT (2) TCTCCATCCT
| 3.6 | 0.0036 |
| P4.5 retina | TACAGTATTT (2) TCTCCATCCT TTGGAATCCA
| 6 | 0.006 |
| P6.5 retina | TACAGTATTT (2) TTTGGTTTGG (2)
| 3.4 | 0.0034 |
| P10.5 crx- retina | TACAGTATTT (2) TCTCCATCCT TTGGAATCCA
| 11.2 | 0.0112 |
| P10.5 crx+ retina | TACAGTATTT (2) TTGGAATCCA TTTGGTTTGG (2)
| 7.6 | 0.0076 |
| ONL | TACAGTATTT (2) TTGGAATCCA
| 3.8 | 0.0038 |