Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.216386	Snrp70	U1 small nuclear ribonucleoprotein polypeptide A	7	7 23.0 cM	20637
Gene Ontology	nucleus | ribonucleoprotein complex | RNA binding | spliceosome complex | viral nucleocapsid
Human Homolog	SNRP70[small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAACTAGC (2) CCTGGTTCCC CTCCTAATCT 13 0.013 Cb medulloblastoma AAGAACTAGC (2) CTCCTAATCT 4.6 0.0046 P8 GC+1d culture AAGAACTAGC (2) CTCCTAATCT 16 0.016 P8 GC+SHH+1d culture AAGAACTAGC (2) ATCTACCATT (2) CTCCTAATCT TCTCGACCAT 15.3 0.0153 3T3 fibroblasts CTCCTAATCT 7 0.007 E15 cortex CTCCTAATCT GAGGCAGAGG 29.7 0.0297 P1 cortex AAGAACTAGC (2) ATCTACCATT (2) CTCCTAATCT 36.3 0.0363 Hypothalamus AAGAACTAGC (2) CTCCTAATCT GAGGCAGAGG TACCCATCAC TCTCGACCAT 25.3 0.0253 E12.5 retina AAGAACTAGC (2) CCTGGTTCCC CTCCTAATCT 11.3 0.0113 E14.5 retina CTCCTAATCT GCCCCAGAGA TACCCATCAC TCTCGACCAT 19.9 0.0199 E16.5 retina ATCTACCATT (2) CTCCTAATCT GCCCCAGAGA TACCCATCAC TCTCGACCAT 23.5 0.0235 E18.5 retina AAGAACTAGC (2) CTCCTAATCT GAGGCAGAGG TACCCATCAC TCCCTTTGAG 29 0.029 P0.5 retina AAGAACTAGC (2) ATCTACCATT (2) CCTGGTTCCC CTCCTAATCT GAGGCAGAGG GTCTTGCTGT (3) TCTCGACCAT 39.5 0.0395 P2.5 retina AAGAACTAGC (2) ATCTACCATT (2) CTCCTAATCT GAGGCAGAGG TACCCATCAC TCCACTACAG TCCCTTTGAG TCTCGACCAT 54.7 0.0547 P4.5 retina AAGAACTAGC (2) ATCTACCATT (2) CCTGGTTCCC CTCCTAATCT TCCACTACAG TCTCGACCAT 47.7 0.0477 P6.5 retina AAGAACTAGC (2) ATCTACCATT (2) CTCCTAATCT TCCCTTTGAG TCTCGACCAT 36.8 0.0368 P10.5 crx- retina AAGAACTAGC (2) CTCCTAATCT GTCTTGCTGT (3) TACCCATCAC TCTCGACCAT 28 0.028 P10.5 crx+ retina AAGAACTAGC (2) CTCCTAATCT TACCCATCAC 11.5 0.0115 Adult retinal CTCCTAATCT TCCACTACAG TCTCGACCAT 29.7 0.0297 ONL CTCCTAATCT GCCCCAGAGA 17.2 0.0172