Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21645	Anapc11	anaphase promoting complex subunit 11 homolog (yeast)	11		66156
Gene Ontology	cell cycle | mitosis | nucleus | protein ubiquitination | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	ANAPC11[APC11 anaphase promoting complex subunit 11 homolog (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTGCTATG (4) 11.4 0.0114 P8 Cb GC TGTCGCCAGG 9.8 0.0098 P8 Cb GC GGAAAAAAAA (69) 8.2 0.0082 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC AAAAAAAGAA (15) 1.6 0.0016 P8 Cb GC AAGGTGAAAA 1.6 0.0016 Cb medulloblastoma GGAAAAAAAA (69) 41.6 0.0416 Cb medulloblastoma TTTTGCTATG (4) 16.2 0.0162 Cb medulloblastoma TGTCGCCAGG 6.9 0.0069 Cb medulloblastoma AAAAAAAGAA (15) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture TGTCGCCAGG 10.3 0.0103 P8 GC+1d culture TTTTGCTATG (4) 10.3 0.0103 P8 GC+1d culture GGAAAAAAAA (69) 5.7 0.0057 P8 GC+1d culture GCCCCTGCAT (4) 2.3 0.0023 P8 GC+1d culture AAAAAAAGAA (15) 1.1 0.0011 P8 GC+SHH+1d culture TGTCGCCAGG 9.4 0.0094 P8 GC+SHH+1d culture TTTTGCTATG (4) 9.4 0.0094 P8 GC+SHH+1d culture GGAAAAAAAA (69) 7 0.007 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CTGCTAGCAG (4) 1.2 0.0012 3T3 fibroblasts TGTCGCCAGG 24.5 0.0245 E15 cortex TGTCGCCAGG 14.8 0.0148 E15 cortex GGAAAAAAAA (69) 9.9 0.0099 E15 cortex TGGAAGCAGT (3) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex GGAAAAAAAA (69) 4.5 0.0045 P1 cortex TTTTGCTATG (4) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus GGAAAAAAAA (69) 14.5 0.0145 Hypothalamus TTTTGCTATG (4) 12.7 0.0127 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus TGTCGCCAGG 5.4 0.0054 Hypothalamus AAAAAAAGAA (15) 1.8 0.0018 Hypothalamus CTGCTAGCAG (4) 1.8 0.0018 E12.5 retina TTTTGCTATG (4) 9.4 0.0094 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina TGTCGCCAGG 5.6 0.0056 E12.5 retina GCCCCTGCAT (4) 3.8 0.0038 E12.5 retina AAAAAAAGAA (15) 1.9 0.0019 E12.5 retina GGAAAAAAAA (69) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina GGAAAAAAAA (69) 10.9 0.0109 E14.5 retina TGTCGCCAGG 7.3 0.0073 E14.5 retina GCCCCTGCAT (4) 1.8 0.0018 E14.5 retina TGGAAGCAGT (3) 1.8 0.0018 E14.5 retina TTTTGCTATG (4) 1.8 0.0018 E16.5 retina TTTTGCTATG (4) 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina CTGCTAGCAG (4) 3.6 0.0036 E16.5 retina GCCCCTGCAT (4) 3.6 0.0036 E16.5 retina TGTCGCCAGG 3.6 0.0036 E16.5 retina AAGGTGAAAA 1.8 0.0018 E16.5 retina GGAAAAAAAA (69) 1.8 0.0018 E18.5 retina GGAAAAAAAA (69) 16.4 0.0164 E18.5 retina TTTTGCTATG (4) 12.7 0.0127 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TGGAAGCACT (7) 1.8 0.0018 E18.5 retina TGGAAGCAGT (3) 1.8 0.0018 E18.5 retina TGTCGCCAGG 1.8 0.0018 P0.5 retina GGAAAAAAAA (69) 13.7 0.0137 P0.5 retina TGTCGCCAGG 11.8 0.0118 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina TTTTGCTATG (4) 3.9 0.0039 P2.5 retina AAAAAAAGAA (15) 7 0.007 P2.5 retina GGAAAAAAAA (69) 7 0.007 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina GCCCCTGCAT (4) 1.8 0.0018 P2.5 retina TTTTGCTATG (4) 1.8 0.0018 P4.5 retina GGAAAAAAAA (69) 13.9 0.0139 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina TGTCGCCAGG 4 0.004 P4.5 retina TGGAAGCACT (7) 2 0.002 P4.5 retina TTTTGCTATG (4) 2 0.002 P6.5 retina GGAAAAAAAA (69) 13.3 0.0133 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina TGTCGCCAGG 5 0.005 P6.5 retina TTTTGCTATG (4) 3.3 0.0033 P6.5 retina CTGCTAGCAG (4) 1.7 0.0017 P6.5 retina TGGAAGCACT (7) 1.7 0.0017 P10.5 crx- retina TGTCGCCAGG 9.3 0.0093 P10.5 crx- retina TTTTGCTATG (4) 7.4 0.0074 P10.5 crx- retina GGAAAAAAAA (69) 3.7 0.0037 P10.5 crx- retina AAGGTGAAAA 1.9 0.0019 P10.5 crx+ retina GGAAAAAAAA (69) 15.4 0.0154 P10.5 crx+ retina TTTTGCTATG (4) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina TGGAAGCACT (7) 1.9 0.0019 P10.5 crx+ retina TGTCGCCAGG 1.9 0.0019 Adult retinal TGTCGCCAGG 14.8 0.0148 Adult retinal ATGAACACTG (30) 11.1 0.0111 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GGAAAAAAAA (69) 5.6 0.0056 Adult retinal AAAAAAAGAA (15) 3.7 0.0037 Adult retinal GCCCCTGCAT (4) 1.9 0.0019 Adult retinal TTTTGCTATG (4) 1.9 0.0019 ONL GGAAAAAAAA (69) 17.2 0.0172 ONL ATGAACACTG (30) 13.4 0.0134 ONL TTTTGCTATG (4) 7.7 0.0077 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL AAAAAAAGAA (15) 1.9 0.0019 ONL TGTCGCCAGG 1.9 0.0019