Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21649	9430034D17Rik	RIKEN cDNA 9430034D17 gene	X		77286
Gene Ontology	DNA binding | double-stranded RNA binding | intracellular | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent
Human Homolog	NRF[NF-kappa B-repressing factor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 34 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma CTGAAACACT GTTTGTGCAC (2) TCAGGTCATT (3) 6.9 0.0069 P8 GC+1d culture GATTGTATAA (2) TCAGGTCATT (3) 2.2 0.0022 P8 GC+SHH+1d culture CTGAAACACT GATTGTATAA (2) 5.8 0.0058 3T3 fibroblasts CTGAAACACT GTTTGTGCAC (2) 7 0.007 E15 cortex GTTTGTGCAC (2) TCAGGTCATT (3) 9.8 0.0098 P1 cortex CTGAAACACT GATTGTATAA (2) 9 0.009 Hypothalamus CTGAAACACT GATTGTATAA (2) TCAGGTCATT (3) 5.4 0.0054 E12.5 retina TCAGGTCATT (3) 3.8 0.0038 E14.5 retina TCAGGTCATT (3) 5.5 0.0055 E16.5 retina GATTGTATAA (2) TCAGGTCATT (3) 9 0.009 P0.5 retina CTGAAACACT TCAGGTCATT (3) 7.8 0.0078 P2.5 retina TCAGGTCATT (3) 1.8 0.0018 P4.5 retina GATTGTATAA (2) GTTTGTGCAC (2) 6 0.006 P6.5 retina CTGAAACACT GATTGTATAA (2) 5 0.005 P10.5 crx- retina GTTTGTGCAC (2) TCAGGTCATT (3) 3.8 0.0038 P10.5 crx+ retina CTGAAACACT 1.9 0.0019 Adult retinal CTGAAACACT GTTTGTGCAC (2) TCAGGTCATT (3) 7.5 0.0075 ONL GATTGTATAA (2) 1.9 0.0019