Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.21652 3930401K13RikRIKEN cDNA 3930401K13 gene 16  16 A1 (16 3.4 cM)  74022 
 Human Homolog N-PAC[cytokine-like nuclear factor n-pac]
 Clusters 
   Neighbors    

Total 6 In Situ Hybridization Images

Images -- Click to Enlarge



SAGE Tags

Total 160 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCTTGCTTTTGG (2)21.20.0212
P8 Cb GCATTTTGTGCA17.90.0179
P8 Cb GCGTGGCGCACG (61)13.10.0131
P8 Cb GCTGAGCCTGGT (3)9.80.0098
P8 Cb GCGCAGCTGCAG (4)1.60.0016
P8 Cb GCTCCTGAGATC (4)1.60.0016
P8 Cb GCTTTTGTCTTT (5)1.60.0016
P8 Cb GCTTTTGTTTTT (9)1.60.0016
Cb medulloblastomaATTTTGTGCA23.10.0231
Cb medulloblastomaTGAGCCTGGT (3)11.60.0116
Cb medulloblastomaCTCACAAGAA (5)6.90.0069
Cb medulloblastomaGTGGCGCACG (61)6.90.0069
Cb medulloblastomaTTGCTTTTGG (2)6.90.0069
Cb medulloblastomaATAAAGATTA (2)2.30.0023
Cb medulloblastomaATATGCCTGC (4)2.30.0023
Cb medulloblastomaGGACAAGGAA (2)2.30.0023
Cb medulloblastomaGGCACGGGGC (6)2.30.0023
Cb medulloblastomaTCCTGAGATC (4)2.30.0023
Cb medulloblastomaTTTTGTTTTT (9)2.30.0023
P8 GC+1d cultureTTTTGTTTTC (5)28.50.0285
P8 GC+1d cultureTTGCTTTTGG (2)18.30.0183
P8 GC+1d cultureATTTTGTGCA160.016
P8 GC+1d cultureTGAGCCTGGT (3)10.30.0103
P8 GC+1d cultureGTGGCGCACG (61)6.80.0068
P8 GC+1d cultureGCCTGGGAAT (3)1.10.0011
P8 GC+1d cultureGGCACGGGGC (6)1.10.0011
P8 GC+1d cultureTCTAGATGAG (6)1.10.0011
P8 GC+SHH+1d cultureATTTTGTGCA23.40.0234
P8 GC+SHH+1d cultureTTTTGTTTTC (5)22.20.0222
P8 GC+SHH+1d cultureTGAGCCTGGT (3)18.70.0187
P8 GC+SHH+1d cultureTTGCTTTTGG (2)18.70.0187
P8 GC+SHH+1d cultureTTTTGTTTTT (9)4.70.0047
P8 GC+SHH+1d cultureGGCACGGGGC (6)3.50.0035
P8 GC+SHH+1d cultureTTTTGTCTTT (5)3.50.0035
P8 GC+SHH+1d cultureCTCACAAGAA (5)2.30.0023
P8 GC+SHH+1d cultureGTGGCGCACG (61)2.30.0023
P8 GC+SHH+1d cultureGCAGCTGCAG (4)1.20.0012
P8 GC+SHH+1d cultureGCCTGGGAAT (3)1.20.0012
P8 GC+SHH+1d cultureTCCTGAGATC (4)1.20.0012
3T3 fibroblastsGTGGCGCACG (61)63.10.0631
3T3 fibroblastsTGAGCCTGGT (3)210.021
3T3 fibroblastsATTTTGTGCA3.50.0035
E15 cortexGTGGCGCACG (61)113.80.1138
E15 cortexTTGCTTTTGG (2)24.70.0247
E15 cortexTGAGCCTGGT (3)14.80.0148
E15 cortexATTTTGTGCA4.90.0049
E15 cortexTCCTGAGATC (4)4.90.0049
P1 cortexGTGGCGCACG (61)18.20.0182
P1 cortexTTGCTTTTGG (2)13.60.0136
P1 cortexTTTTGTTTTT (9)9.10.0091
P1 cortexATTTTGTGCA4.50.0045
P1 cortexTGAGCCTGGT (3)4.50.0045
HypothalamusTGAGCCTGGT (3)12.70.0127
HypothalamusCTCACAAGAA (5)9.10.0091
HypothalamusATTTTGTGCA3.60.0036
HypothalamusGTGGCGCACG (61)3.60.0036
HypothalamusTTGCTTTTGG (2)3.60.0036
HypothalamusGAGGGAGGGG (5)1.80.0018
HypothalamusGCCTGGGAAT (3)1.80.0018
HypothalamusTCCTGAGATC (4)1.80.0018
HypothalamusTCTAGATGAG (6)1.80.0018
HypothalamusTTTTGTTTTT (9)1.80.0018
E12.5 retinaATTTTGTGCA18.80.0188
E12.5 retinaTTGCTTTTGG (2)16.90.0169
E12.5 retinaGTGGCGCACG (61)11.30.0113
E12.5 retinaTGAGCCTGGT (3)7.50.0075
E12.5 retinaATATGCCTGC (4)1.90.0019
E12.5 retinaGGACAAGGAA (2)1.90.0019
E12.5 retinaGGCAAGGCCC (8)1.90.0019
E12.5 retinaTCCTGAGATC (4)1.90.0019
E12.5 retinaTCTAGATGAG (6)1.90.0019
E14.5 retinaGTGGCGCACG (61)29.20.0292
E14.5 retinaTGAGCCTGGT (3)14.60.0146
E14.5 retinaTTGCTTTTGG (2)12.80.0128
E14.5 retinaATTTTGTGCA5.50.0055
E14.5 retinaGCCTGGGAAT (3)3.60.0036
E14.5 retinaTTTTGTTTTT (9)3.60.0036
E14.5 retinaGCAGCTGCAG (4)1.80.0018
E16.5 retinaTTGCTTTTGG (2)290.029
E16.5 retinaTGAGCCTGGT (3)27.20.0272
E16.5 retinaGTGGCGCACG (61)25.40.0254
E16.5 retinaATTTTGTGCA19.90.0199
E16.5 retinaTTTTGTCTTT (5)3.60.0036
E16.5 retinaGCCTGGGAAT (3)1.80.0018
E16.5 retinaTCCTGAGATC (4)1.80.0018
E16.5 retinaTCTAGATGAG (6)1.80.0018
E16.5 retinaTTTTGTTTTT (9)1.80.0018
E18.5 retinaTGAGCCTGGT (3)16.40.0164
E18.5 retinaATTTTGTGCA10.90.0109
E18.5 retinaGTGGCGCACG (61)10.90.0109
E18.5 retinaTTGCTTTTGG (2)9.10.0091
E18.5 retinaGGCAAGGCCC (8)3.60.0036
E18.5 retinaGCAGCTGCAG (4)1.80.0018
E18.5 retinaGGCACGGGGC (6)1.80.0018
E18.5 retinaTTTTGTCTTT (5)1.80.0018
P0.5 retinaGTGGCGCACG (61)25.50.0255
P0.5 retinaATTTTGTGCA13.70.0137
P0.5 retinaTGAGCCTGGT (3)11.80.0118
P0.5 retinaTTGCTTTTGG (2)5.90.0059
P0.5 retinaATATGCCTGC (4)20.002
P0.5 retinaTCCTGAGATC (4)20.002
P2.5 retinaTGAGCCTGGT (3)26.40.0264
P2.5 retinaTTGCTTTTGG (2)21.10.0211
P2.5 retinaGTGGCGCACG (61)17.60.0176
P2.5 retinaATTTTGTGCA70.007
P2.5 retinaATAAAGATTA (2)3.50.0035
P2.5 retinaGGACAAGGAA (2)1.80.0018
P2.5 retinaTCCTGAGATC (4)1.80.0018
P4.5 retinaGTGGCGCACG (61)17.80.0178
P4.5 retinaTGAGCCTGGT (3)11.90.0119
P4.5 retinaTTGCTTTTGG (2)11.90.0119
P4.5 retinaATTTTGTGCA9.90.0099
P4.5 retinaGGCAAGGCCC (8)5.90.0059
P4.5 retinaTCCTGAGATC (4)40.004
P4.5 retinaTCTAGATGAG (6)20.002
P4.5 retinaTTTTGTTTTT (9)20.002
P6.5 retinaGTGGCGCACG (61)38.30.0383
P6.5 retinaATTTTGTGCA18.30.0183
P6.5 retinaTGAGCCTGGT (3)150.015
P6.5 retinaTTGCTTTTGG (2)100.01
P6.5 retinaATAAAGATTA (2)6.70.0067
P6.5 retinaGAGGGAGGGG (5)1.70.0017
P6.5 retinaGGCAAGGCCC (8)1.70.0017
P6.5 retinaGGCACGGGGC (6)1.70.0017
P6.5 retinaTCCTGAGATC (4)1.70.0017
P6.5 retinaTCTAGATGAG (6)1.70.0017
P10.5 crx- retinaATTTTGTGCA35.30.0353
P10.5 crx- retinaTGAGCCTGGT (3)22.30.0223
P10.5 crx- retinaTTGCTTTTGG (2)20.40.0204
P10.5 crx- retinaGTGGCGCACG (61)130.013
P10.5 crx- retinaTCCTGAGATC (4)7.40.0074
P10.5 crx- retinaCTCACAAGAA (5)1.90.0019
P10.5 crx- retinaGGCACGGGGC (6)1.90.0019
P10.5 crx- retinaTTTTGTCTTT (5)1.90.0019
P10.5 crx+ retinaGTGGCGCACG (61)32.70.0327
P10.5 crx+ retinaATTTTGTGCA26.90.0269
P10.5 crx+ retinaTGAGCCTGGT (3)13.50.0135
P10.5 crx+ retinaTTGCTTTTGG (2)7.70.0077
P10.5 crx+ retinaGGCAAGGCCC (8)3.80.0038
P10.5 crx+ retinaGGCACGGGGC (6)1.90.0019
P10.5 crx+ retinaTCCTGAGATC (4)1.90.0019
P10.5 crx+ retinaTCTAGATGAG (6)1.90.0019
P10.5 crx+ retinaTTTTGTCTTT (5)1.90.0019
P10.5 crx+ retinaTTTTGTTTTT (9)1.90.0019
Adult retinalGTGGCGCACG (61)22.20.0222
Adult retinalTGAGCCTGGT (3)14.80.0148
Adult retinalATTTTGTGCA9.30.0093
Adult retinalTTGCTTTTGG (2)3.70.0037
Adult retinalTTTTGTCTTT (5)3.70.0037
Adult retinalGGCAAGGCCC (8)1.90.0019
Adult retinalGGCACGGGGC (6)1.90.0019
Adult retinalTCCTGAGATC (4)1.90.0019
ONLGTGGCGCACG (61)230.023
ONLATTTTGTGCA15.30.0153
ONLGAGGGAGGGG (5)3.80.0038
ONLATAAAGATTA (2)1.90.0019
ONLGGCAAGGCCC (8)1.90.0019
ONLTCTAGATGAG (6)1.90.0019
ONLTTGCTTTTGG (2)1.90.0019
ONLTTTTGTCTTT (5)1.90.0019