Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21652	3930401K13Rik	RIKEN cDNA 3930401K13 gene	16	16 A1 (16 3.4 cM)	74022
Human Homolog	N-PAC[cytokine-like nuclear factor n-pac]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

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SAGE Tags

Total 160 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTTGTGCA GCAGCTGCAG (2) GTGGCGCACG TCCTGAGATC TGAGCCTGGT (2) TTGCTTTTGG TTTTGTCTTT (2) TTTTGTTTTT (2) 68.4 0.0684 Cb medulloblastoma ATAAAGATTA ATATGCCTGC ATTTTGTGCA CTCACAAGAA (2) GGACAAGGAA GGCACGGGGC (3) GTGGCGCACG TCCTGAGATC TGAGCCTGGT (2) TTGCTTTTGG TTTTGTTTTT (2) 69.2 0.0692 P8 GC+1d culture ATTTTGTGCA GCCTGGGAAT GGCACGGGGC (3) GTGGCGCACG TCTAGATGAG (4) TGAGCCTGGT (2) TTGCTTTTGG TTTTGTTTTC (2) 83.2 0.0832 P8 GC+SHH+1d culture ATTTTGTGCA CTCACAAGAA (2) GCAGCTGCAG (2) GCCTGGGAAT GGCACGGGGC (3) GTGGCGCACG TCCTGAGATC TGAGCCTGGT (2) TTGCTTTTGG TTTTGTCTTT (2) TTTTGTTTTC (2) TTTTGTTTTT (2) 102.9 0.1029 3T3 fibroblasts ATTTTGTGCA GTGGCGCACG TGAGCCTGGT (2) 87.6 0.0876 E15 cortex ATTTTGTGCA GTGGCGCACG TCCTGAGATC TGAGCCTGGT (2) TTGCTTTTGG 163.1 0.1631 P1 cortex ATTTTGTGCA GTGGCGCACG TGAGCCTGGT (2) TTGCTTTTGG TTTTGTTTTT (2) 49.9 0.0499 Hypothalamus ATTTTGTGCA CTCACAAGAA (2) GAGGGAGGGG GCCTGGGAAT GTGGCGCACG TCCTGAGATC TCTAGATGAG (4) TGAGCCTGGT (2) TTGCTTTTGG TTTTGTTTTT (2) 41.6 0.0416 E12.5 retina ATATGCCTGC ATTTTGTGCA GGACAAGGAA GGCAAGGCCC GTGGCGCACG TCCTGAGATC TCTAGATGAG (4) TGAGCCTGGT (2) TTGCTTTTGG 64 0.064 E14.5 retina ATTTTGTGCA GCAGCTGCAG (2) GCCTGGGAAT GTGGCGCACG TGAGCCTGGT (2) TTGCTTTTGG TTTTGTTTTT (2) 71.1 0.0711 E16.5 retina ATTTTGTGCA GCCTGGGAAT GTGGCGCACG TCCTGAGATC TCTAGATGAG (4) TGAGCCTGGT (2) TTGCTTTTGG TTTTGTCTTT (2) TTTTGTTTTT (2) 112.3 0.1123 E18.5 retina ATTTTGTGCA GCAGCTGCAG (2) GGCAAGGCCC GGCACGGGGC (3) GTGGCGCACG TGAGCCTGGT (2) TTGCTTTTGG TTTTGTCTTT (2) 56.3 0.0563 P0.5 retina ATATGCCTGC ATTTTGTGCA GTGGCGCACG TCCTGAGATC TGAGCCTGGT (2) TTGCTTTTGG 60.9 0.0609 P2.5 retina ATAAAGATTA ATTTTGTGCA GGACAAGGAA GTGGCGCACG TCCTGAGATC TGAGCCTGGT (2) TTGCTTTTGG 79.2 0.0792 P4.5 retina ATTTTGTGCA GGCAAGGCCC GTGGCGCACG TCCTGAGATC TCTAGATGAG (4) TGAGCCTGGT (2) TTGCTTTTGG TTTTGTTTTT (2) 65.4 0.0654 P6.5 retina ATAAAGATTA ATTTTGTGCA GAGGGAGGGG GGCAAGGCCC GGCACGGGGC (3) GTGGCGCACG TCCTGAGATC TCTAGATGAG (4) TGAGCCTGGT (2) TTGCTTTTGG 96.8 0.0968 P10.5 crx- retina ATTTTGTGCA CTCACAAGAA (2) GGCACGGGGC (3) GTGGCGCACG TCCTGAGATC TGAGCCTGGT (2) TTGCTTTTGG TTTTGTCTTT (2) 104.1 0.1041 P10.5 crx+ retina ATTTTGTGCA GGCAAGGCCC GGCACGGGGC (3) GTGGCGCACG TCCTGAGATC TCTAGATGAG (4) TGAGCCTGGT (2) TTGCTTTTGG TTTTGTCTTT (2) TTTTGTTTTT (2) 94.1 0.0941 Adult retinal ATTTTGTGCA GGCAAGGCCC GGCACGGGGC (3) GTGGCGCACG TCCTGAGATC TGAGCCTGGT (2) TTGCTTTTGG TTTTGTCTTT (2) 59.4 0.0594 ONL ATAAAGATTA ATTTTGTGCA GAGGGAGGGG GGCAAGGCCC GTGGCGCACG TCTAGATGAG (4) TTGCTTTTGG TTTTGTCTTT (2) 51.6 0.0516