Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.21652
3930401K13Rik
RIKEN cDNA 3930401K13 gene
16
16 A1 (16 3.4 cM)
74022
Human Homolog
N-PAC[cytokine-like nuclear factor n-pac]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 6 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATTTTGTGCA
GCAGCTGCAG
(
2
)
19.5
0.0195
Cb medulloblastoma
ATATGCCTGC
ATTTTGTGCA
GGACAAGGAA
GGCACGGGGC
(
3
)
30
0.03
P8 GC+1d culture
ATTTTGTGCA
GGCACGGGGC
(
3
)
17.1
0.0171
P8 GC+SHH+1d culture
ATTTTGTGCA
GCAGCTGCAG
(
2
)
GGCACGGGGC
(
3
)
28.1
0.0281
3T3 fibroblasts
ATTTTGTGCA
3.5
0.0035
E15 cortex
ATTTTGTGCA
4.9
0.0049
P1 cortex
ATTTTGTGCA
4.5
0.0045
Hypothalamus
ATTTTGTGCA
3.6
0.0036
E12.5 retina
ATATGCCTGC
ATTTTGTGCA
GGACAAGGAA
22.6
0.0226
E14.5 retina
ATTTTGTGCA
GCAGCTGCAG
(
2
)
7.3
0.0073
E16.5 retina
ATTTTGTGCA
19.9
0.0199
E18.5 retina
ATTTTGTGCA
GCAGCTGCAG
(
2
)
GGCACGGGGC
(
3
)
14.5
0.0145
P0.5 retina
ATATGCCTGC
ATTTTGTGCA
15.7
0.0157
P2.5 retina
ATTTTGTGCA
GGACAAGGAA
8.8
0.0088
P4.5 retina
ATTTTGTGCA
9.9
0.0099
P6.5 retina
ATTTTGTGCA
GGCACGGGGC
(
3
)
20
0.02
P10.5 crx- retina
ATTTTGTGCA
GGCACGGGGC
(
3
)
37.2
0.0372
P10.5 crx+ retina
ATTTTGTGCA
GGCACGGGGC
(
3
)
28.8
0.0288
Adult retinal
ATTTTGTGCA
GGCACGGGGC
(
3
)
11.2
0.0112
ONL
ATTTTGTGCA
15.3
0.0153