Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.217004
D430024F16Rik
RIKEN cDNA D430024F16 gene
4
230801
Mm.217004
1700041L08Rik
RIKEN cDNA 1700041L08 gene
4
73315
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 56 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGGCTAACA (
10
)
6.5
0.0065
P8 Cb GC
TGGCTGCTGG
(
16
)
1.6
0.0016
Cb medulloblastoma
GTGGCTAACA (
10
)
13.9
0.0139
P8 GC+1d culture
GTGGCTAACA (
10
)
8
0.008
P8 GC+1d culture
GGGCAGCTGG (
12
)
1.1
0.0011
P8 GC+1d culture
TGGCTGCTGG
(
16
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGGCTAACA (
10
)
11.7
0.0117
P8 GC+SHH+1d culture
GGGCAGCTGG (
12
)
3.5
0.0035
P8 GC+SHH+1d culture
TGGCTGCTGG
(
16
)
1.2
0.0012
3T3 fibroblasts
GGGCAGCTGG (
12
)
21
0.021
3T3 fibroblasts
GTGGCTAACA (
10
)
10.5
0.0105
3T3 fibroblasts
TGGCTGCTGG
(
16
)
3.5
0.0035
E15 cortex
GTGGCTAACA (
10
)
9.9
0.0099
E15 cortex
GGAAGCAAGT (
4
)
4.9
0.0049
E15 cortex
TGGCTGCTGG
(
16
)
4.9
0.0049
P1 cortex
GTGGCTAACA (
10
)
9.1
0.0091
Hypothalamus
GTGGCTAACA (
10
)
25.4
0.0254
Hypothalamus
TGGCTGCTGG
(
16
)
3.6
0.0036
Hypothalamus
GGAAGCAAGT (
4
)
1.8
0.0018
Hypothalamus
GGGCAGCTGG (
12
)
1.8
0.0018
E12.5 retina
GTGGCTAACA (
10
)
15
0.015
E12.5 retina
GGGCAGCTGG (
12
)
1.9
0.0019
E12.5 retina
TGGCTGCTGG
(
16
)
1.9
0.0019
E14.5 retina
TGGCTGCTGG
(
16
)
23.7
0.0237
E14.5 retina
GTGGCTAACA (
10
)
14.6
0.0146
E16.5 retina
GTGGCTAACA (
10
)
30.8
0.0308
E16.5 retina
TGGCTGCTGG
(
16
)
7.2
0.0072
E16.5 retina
GGGCAGCTGG (
12
)
1.8
0.0018
E18.5 retina
GTGGCTAACA (
10
)
12.7
0.0127
E18.5 retina
GGAAGCAAGT (
4
)
1.8
0.0018
E18.5 retina
TGGCTGCTGG
(
16
)
1.8
0.0018
P0.5 retina
GTGGCTAACA (
10
)
13.7
0.0137
P0.5 retina
GGAAGCAAGT (
4
)
2
0.002
P0.5 retina
GGGCAGCTGG (
12
)
2
0.002
P2.5 retina
GTGGCTAACA (
10
)
10.6
0.0106
P2.5 retina
TGGCTGCTGG
(
16
)
8.8
0.0088
P2.5 retina
GGAAGCAAGT (
4
)
1.8
0.0018
P2.5 retina
GGGCAGCTGG (
12
)
1.8
0.0018
P4.5 retina
GTGGCTAACA (
10
)
17.8
0.0178
P4.5 retina
GGGCAGCTGG (
12
)
2
0.002
P4.5 retina
TGGCTGCTGG
(
16
)
2
0.002
P6.5 retina
GTGGCTAACA (
10
)
15
0.015
P6.5 retina
GGAAGCAAGT (
4
)
3.3
0.0033
P6.5 retina
TGGCTGCTGG
(
16
)
3.3
0.0033
P6.5 retina
GGGCAGCTGG (
12
)
1.7
0.0017
P10.5 crx- retina
GGGCAGCTGG (
12
)
5.6
0.0056
P10.5 crx- retina
GTGGCTAACA (
10
)
3.7
0.0037
P10.5 crx- retina
TGGCTGCTGG
(
16
)
1.9
0.0019
P10.5 crx+ retina
GTGGCTAACA (
10
)
11.5
0.0115
Adult retinal
GTGGCTAACA (
10
)
11.1
0.0111
Adult retinal
GGGCAGCTGG (
12
)
7.4
0.0074
Adult retinal
TGGCTGCTGG
(
16
)
5.6
0.0056
ONL
GTGGCTAACA (
10
)
7.7
0.0077
ONL
TGGCTGCTGG
(
16
)
5.7
0.0057
ONL
GGAAGCAAGT (
4
)
1.9
0.0019
ONL
GGGCAGCTGG (
12
)
1.9
0.0019
