Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.218048	6820402O18Rik	RIKEN cDNA 6820402O18 gene	19		71451
Mm.218048	Obfc1	oligonucleotide/oligosaccharide-binding fold containing 1	19		108689
Human Homolog	OBFC1[oligonucleotide/oligosaccharide-binding fold containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC GCAAAAAAAA (50) 14.7 0.0147 P8 Cb GC CCTTTAATTT (19) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma GCAAAAAAAA (50) 60.1 0.0601 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture GCAAAAAAAA (50) 12.6 0.0126 P8 GC+1d culture GCTGACATCA (10) 1.1 0.0011 P8 GC+1d culture GCTTGGCATT (4) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture GCAAAAAAAA (50) 29.3 0.0293 P8 GC+SHH+1d culture GCTGACATCA (10) 1.2 0.0012 P8 GC+SHH+1d culture GGGAAGGGAA (14) 1.2 0.0012 P8 GC+SHH+1d culture TTACTCTTTT (3) 1.2 0.0012 3T3 fibroblasts GCAAAAAAAA (50) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex GCAAAAAAAA (50) 9.9 0.0099 E15 cortex ACACACACAA (3) 4.9 0.0049 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex GCAAAAAAAA (50) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus GCAAAAAAAA (50) 19.9 0.0199 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina GCAAAAAAAA (50) 9.4 0.0094 E12.5 retina ACACACACAA (3) 1.9 0.0019 E12.5 retina GGGAAGGGAA (14) 1.9 0.0019 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina GCAAAAAAAA (50) 12.8 0.0128 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina GCAAAAAAAA (50) 10.9 0.0109 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina GCAAAAAAAA (50) 25.5 0.0255 E18.5 retina ACACACACAA (3) 3.6 0.0036 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GCAAAAAAAA (50) 17.7 0.0177 P0.5 retina TTACTCTTTT (3) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina GCAAAAAAAA (50) 22.9 0.0229 P2.5 retina GGGAAGGGAA (14) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina GCAAAAAAAA (50) 25.8 0.0258 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina GCAAAAAAAA (50) 11.7 0.0117 P6.5 retina GGGAAGGGAA (14) 3.3 0.0033 P6.5 retina ACACACACAA (3) 1.7 0.0017 P6.5 retina GCTTGGCATT (4) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina GCAAAAAAAA (50) 5.6 0.0056 P10.5 crx- retina CCTTTAATTT (19) 3.7 0.0037 P10.5 crx- retina GCTGACATCA (10) 1.9 0.0019 P10.5 crx- retina TTACTCTTTT (3) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina GCAAAAAAAA (50) 1.9 0.0019 P10.5 crx+ retina GCTTGGCATT (4) 1.9 0.0019 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal GCAAAAAAAA (50) 11.1 0.0111 Adult retinal ACACACACAA (3) 3.7 0.0037 Adult retinal GCTTGGCATT (4) 1.9 0.0019 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL GGGAAGGGAA (14) 3.8 0.0038 ONL GCAAAAAAAA (50) 1.9 0.0019