Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.218233
Myh10
myosin heavy chain 10, non-muscle
11
11 40.0 cM
77579
Mm.218233
C78226
expressed sequence C78226
11
97703
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 142 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
TGAAAAAAAA (
81
)
27.7
0.0277
P8 Cb GC
GGTTTGGAAT
(
6
)
11.4
0.0114
P8 Cb GC
TATAAATATA (
4
)
3.3
0.0033
P8 Cb GC
AAGGGCCAGT (
3
)
1.6
0.0016
P8 Cb GC
CCAAGGGTCC (
4
)
1.6
0.0016
P8 Cb GC
CCTGTCTACT (
5
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
TGAAAAAAAA (
81
)
78.6
0.0786
Cb medulloblastoma
GGTTTGGAAT
(
6
)
11.6
0.0116
Cb medulloblastoma
CCAAGGGTCC (
4
)
2.3
0.0023
Cb medulloblastoma
CCTGTCTACT (
5
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
TGAAAAAAAA (
81
)
26.3
0.0263
P8 GC+1d culture
CCTGTCTACT (
5
)
9.1
0.0091
P8 GC+1d culture
GGTTTGGAAT
(
6
)
6.8
0.0068
P8 GC+1d culture
AAGGGCCAGT (
3
)
1.1
0.0011
P8 GC+1d culture
CCAAGGGTCC (
4
)
1.1
0.0011
P8 GC+1d culture
CCGCTCTCTT (
6
)
1.1
0.0011
P8 GC+1d culture
GATGGCAAAC
(
3
)
1.1
0.0011
P8 GC+1d culture
TATAAATATA (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
TGAAAAAAAA (
81
)
57.4
0.0574
P8 GC+SHH+1d culture
CCTGTCTACT (
5
)
11.7
0.0117
P8 GC+SHH+1d culture
GGTTTGGAAT
(
6
)
11.7
0.0117
P8 GC+SHH+1d culture
CCAAGGGTCC (
4
)
3.5
0.0035
P8 GC+SHH+1d culture
AAGGGCCAGT (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
ACTGAGGAGG (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TATAAATATA (
4
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
CCTGTCTACT (
5
)
21
0.021
3T3 fibroblasts
CCGCTCTCTT (
6
)
14
0.014
3T3 fibroblasts
CCAAGGGTCC (
4
)
7
0.007
3T3 fibroblasts
GAGCTGCTCA
(
9
)
7
0.007
3T3 fibroblasts
TGAAAAAAAA (
81
)
7
0.007
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
TGAAAAAAAA (
81
)
29.7
0.0297
E15 cortex
CCTGTCTACT (
5
)
14.8
0.0148
E15 cortex
GAGCTGCTCA
(
9
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
GGTTTGGAAT
(
6
)
18.2
0.0182
P1 cortex
CCAAGGGTCC (
4
)
9.1
0.0091
P1 cortex
CCTGTCTACT (
5
)
9.1
0.0091
P1 cortex
TGAAAAAAAA (
81
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
TGAAAAAAAA (
81
)
36.2
0.0362
Hypothalamus
TGGGCCCCTG (
4
)
9.1
0.0091
Hypothalamus
GAGCTGCTCA
(
9
)
3.6
0.0036
Hypothalamus
GCTGGAACTT (
3
)
3.6
0.0036
Hypothalamus
CCTGTCTACT (
5
)
1.8
0.0018
Hypothalamus
GATGGCAAAC
(
3
)
1.8
0.0018
Hypothalamus
GGTTTGGAAT
(
6
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
TGAAAAAAAA (
81
)
31.9
0.0319
E12.5 retina
GGTTTGGAAT
(
6
)
9.4
0.0094
E12.5 retina
CCTGTCTACT (
5
)
7.5
0.0075
E12.5 retina
TATAAATATA (
4
)
3.8
0.0038
E12.5 retina
CCAAGGGTCC (
4
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TGAAAAAAAA (
81
)
49.2
0.0492
E14.5 retina
CCTGTCTACT (
5
)
5.5
0.0055
E14.5 retina
GGTTTGGAAT
(
6
)
5.5
0.0055
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
TGAAAAAAAA (
81
)
16.3
0.0163
E16.5 retina
GGTTTGGAAT
(
6
)
9.1
0.0091
E16.5 retina
CCTGTCTACT (
5
)
5.4
0.0054
E16.5 retina
TGGGCCCCTG (
4
)
5.4
0.0054
E16.5 retina
ACTGAGGAGG (
4
)
1.8
0.0018
E16.5 retina
CCAAGGGTCC (
4
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
TGAAAAAAAA (
81
)
74.6
0.0746
E18.5 retina
GGTTTGGAAT
(
6
)
9.1
0.0091
E18.5 retina
AAGGGCCAGT (
3
)
1.8
0.0018
E18.5 retina
CCTGTCTACT (
5
)
1.8
0.0018
E18.5 retina
TATAAATATA (
4
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TGAAAAAAAA (
81
)
15.7
0.0157
P0.5 retina
CCTGTCTACT (
5
)
13.7
0.0137
P0.5 retina
GGTTTGGAAT
(
6
)
3.9
0.0039
P0.5 retina
CCAAGGGTCC (
4
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
TGAAAAAAAA (
81
)
42.2
0.0422
P2.5 retina
GGTTTGGAAT
(
6
)
3.5
0.0035
P2.5 retina
TGGGCCCCTG (
4
)
3.5
0.0035
P2.5 retina
CCAAGGGTCC (
4
)
1.8
0.0018
P2.5 retina
GATGGCAAAC
(
3
)
1.8
0.0018
P2.5 retina
TATAAATATA (
4
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
TGAAAAAAAA (
81
)
43.6
0.0436
P4.5 retina
CCTGTCTACT (
5
)
4
0.004
P4.5 retina
GGTTTGGAAT
(
6
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
TGAAAAAAAA (
81
)
33.3
0.0333
P6.5 retina
GCTGGAACTT (
3
)
1.7
0.0017
P6.5 retina
GGTTTGGAAT
(
6
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
CCTGTCTACT (
5
)
20.4
0.0204
P10.5 crx- retina
GGTTTGGAAT
(
6
)
9.3
0.0093
P10.5 crx- retina
TGAAAAAAAA (
81
)
9.3
0.0093
P10.5 crx- retina
CCAAGGGTCC (
4
)
3.7
0.0037
P10.5 crx- retina
GAGCTGCTCA
(
9
)
1.9
0.0019
P10.5 crx- retina
TATAAATATA (
4
)
1.9
0.0019
P10.5 crx- retina
TGGGCCCCTG (
4
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TGAAAAAAAA (
81
)
19.2
0.0192
P10.5 crx+ retina
CCGCTCTCTT (
6
)
5.8
0.0058
P10.5 crx+ retina
CCTGTCTACT (
5
)
5.8
0.0058
P10.5 crx+ retina
CCAAGGGTCC (
4
)
3.8
0.0038
P10.5 crx+ retina
ACTGAGGAGG (
4
)
1.9
0.0019
P10.5 crx+ retina
GCTGGAACTT (
3
)
1.9
0.0019
P10.5 crx+ retina
TGGGCCCCTG (
4
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
CCTGTCTACT (
5
)
14.8
0.0148
Adult retinal
TGAAAAAAAA (
81
)
13
0.013
Adult retinal
GGTTTGGAAT
(
6
)
5.6
0.0056
Adult retinal
CCAAGGGTCC (
4
)
3.7
0.0037
Adult retinal
GCTGGAACTT (
3
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TGAAAAAAAA (
81
)
19.2
0.0192
ONL
CCAAGGGTCC (
4
)
3.8
0.0038
ONL
CCTGTCTACT (
5
)
3.8
0.0038
ONL
TATAAATATA (
4
)
1.9
0.0019
