Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.218317	4930553M18Rik	RIKEN cDNA 4930553M18 gene	9		75316
Human Homolog	MGC5306[hypothetical protein MGC5306]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 113 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGGAGGTAA (2) 9.8 0.0098 P8 Cb GC AAGGGTCCTT (2) 3.3 0.0033 P8 Cb GC CCTTTGATCC (22) 3.3 0.0033 P8 Cb GC GCTTCCCTTT (7) 3.3 0.0033 P8 Cb GC CTGGGGAAGA (7) 1.6 0.0016 Cb medulloblastoma TAGGAGGTAA (2) 6.9 0.0069 Cb medulloblastoma CCTTTGATCC (22) 2.3 0.0023 Cb medulloblastoma GCTTCCCTTT (7) 2.3 0.0023 P8 GC+1d culture TAGGAGGTAA (2) 11.4 0.0114 P8 GC+1d culture GCTTCCCTTT (7) 3.4 0.0034 P8 GC+1d culture TGAGTTCTGG (3) 2.3 0.0023 P8 GC+1d culture AAGAAAGGAG (4) 1.1 0.0011 P8 GC+1d culture CCTTTGATCC (22) 1.1 0.0011 P8 GC+1d culture GGGTGTATAA (2) 1.1 0.0011 P8 GC+1d culture TGACTATTGA 1.1 0.0011 P8 GC+1d culture TTAAACCTGG (2) 1.1 0.0011 P8 GC+SHH+1d culture TAGGAGGTAA (2) 14.1 0.0141 P8 GC+SHH+1d culture TGAGTTCTGG (3) 4.7 0.0047 P8 GC+SHH+1d culture AAGGGTCCTT (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGAAAGGAG (4) 1.2 0.0012 P8 GC+SHH+1d culture CCTTTGATCC (22) 1.2 0.0012 P8 GC+SHH+1d culture GGGTGTATAA (2) 1.2 0.0012 3T3 fibroblasts AAGAAAGGAG (4) 10.5 0.0105 3T3 fibroblasts TAGGAGGTAA (2) 10.5 0.0105 3T3 fibroblasts GGGTGTATAA (2) 3.5 0.0035 3T3 fibroblasts GTGATGGCTG (8) 3.5 0.0035 E15 cortex TAGGAGGTAA (2) 19.8 0.0198 E15 cortex TTAAACCTGG (2) 4.9 0.0049 P1 cortex CCTTTGATCC (22) 13.6 0.0136 P1 cortex GTGATGGCTG (8) 4.5 0.0045 P1 cortex TAGGAGGTAA (2) 4.5 0.0045 Hypothalamus TAGGAGGTAA (2) 14.5 0.0145 Hypothalamus TGAGTTCTGG (3) 3.6 0.0036 Hypothalamus AAGGGTCCTT (2) 1.8 0.0018 Hypothalamus GGGTGTATAA (2) 1.8 0.0018 E12.5 retina TAGGAGGTAA (2) 13.1 0.0131 E12.5 retina AAGGGTCCTT (2) 5.6 0.0056 E12.5 retina CCTTTGATCC (22) 5.6 0.0056 E12.5 retina GCTTCCCTTT (7) 5.6 0.0056 E12.5 retina TGAGTTCTGG (3) 1.9 0.0019 E12.5 retina TTATCTTTAA (3) 1.9 0.0019 E14.5 retina TAGGAGGTAA (2) 7.3 0.0073 E14.5 retina AAGGGTCCTT (2) 1.8 0.0018 E14.5 retina CCTTTGATCC (22) 1.8 0.0018 E14.5 retina GTGATGGCTG (8) 1.8 0.0018 E14.5 retina TGACTATTGA 1.8 0.0018 E14.5 retina TGAGTTCTGG (3) 1.8 0.0018 E14.5 retina TTAAACCTGG (2) 1.8 0.0018 E16.5 retina AAGGGTCCTT (2) 10.9 0.0109 E16.5 retina AAGAAAGGAG (4) 3.6 0.0036 E16.5 retina CCTTTGATCC (22) 3.6 0.0036 E16.5 retina TAGGAGGTAA (2) 3.6 0.0036 E16.5 retina GTGATGGCTG (8) 1.8 0.0018 E16.5 retina TGACTATTGA 1.8 0.0018 E16.5 retina TGAGATGAGG 1.8 0.0018 E16.5 retina TTAAACCTGG (2) 1.8 0.0018 E16.5 retina TTATCTTTAA (3) 1.8 0.0018 E18.5 retina TAGGAGGTAA (2) 7.3 0.0073 E18.5 retina AAGGGTCCTT (2) 1.8 0.0018 E18.5 retina CCTTTGATCC (22) 1.8 0.0018 E18.5 retina GCTTCCCTTT (7) 1.8 0.0018 E18.5 retina TGACTATTGA 1.8 0.0018 E18.5 retina TTAAACCTGG (2) 1.8 0.0018 P0.5 retina TAGGAGGTAA (2) 25.5 0.0255 P0.5 retina AAGGGTCCTT (2) 5.9 0.0059 P0.5 retina TTAAACCTGG (2) 5.9 0.0059 P0.5 retina TGACTATTGA 3.9 0.0039 P0.5 retina AAGAAAGGAG (4) 2 0.002 P0.5 retina CCTTTGATCC (22) 2 0.002 P0.5 retina CTGGGGAAGA (7) 2 0.002 P0.5 retina GCTTCCCTTT (7) 2 0.002 P0.5 retina TGAGTTCTGG (3) 2 0.002 P0.5 retina TTATCTTTAA (3) 2 0.002 P2.5 retina CCTTTGATCC (22) 7 0.007 P2.5 retina TTAAACCTGG (2) 5.3 0.0053 P2.5 retina TAGGAGGTAA (2) 3.5 0.0035 P2.5 retina GCTTCCCTTT (7) 1.8 0.0018 P2.5 retina TGACTATTGA 1.8 0.0018 P2.5 retina TGAGTTCTGG (3) 1.8 0.0018 P4.5 retina AAGGGTCCTT (2) 7.9 0.0079 P4.5 retina TAGGAGGTAA (2) 7.9 0.0079 P4.5 retina CCTTTGATCC (22) 5.9 0.0059 P4.5 retina GCTTCCCTTT (7) 4 0.004 P4.5 retina TTAAACCTGG (2) 4 0.004 P4.5 retina TGAGTTCTGG (3) 2 0.002 P4.5 retina TTATCTTTAA (3) 2 0.002 P6.5 retina TAGGAGGTAA (2) 11.7 0.0117 P6.5 retina CCTTTGATCC (22) 3.3 0.0033 P6.5 retina TTAAACCTGG (2) 3.3 0.0033 P6.5 retina GCTTCCCTTT (7) 1.7 0.0017 P6.5 retina TGAGATGAGG 1.7 0.0017 P6.5 retina TGAGTTCTGG (3) 1.7 0.0017 P10.5 crx- retina TAGGAGGTAA (2) 20.4 0.0204 P10.5 crx- retina TTAAACCTGG (2) 5.6 0.0056 P10.5 crx- retina AAGGGTCCTT (2) 1.9 0.0019 P10.5 crx- retina GCTTCCCTTT (7) 1.9 0.0019 P10.5 crx- retina TGAGTTCTGG (3) 1.9 0.0019 P10.5 crx+ retina CCTTTGATCC (22) 5.8 0.0058 P10.5 crx+ retina GCTTCCCTTT (7) 3.8 0.0038 P10.5 crx+ retina GTGATGGCTG (8) 1.9 0.0019 P10.5 crx+ retina TGAGATGAGG 1.9 0.0019 P10.5 crx+ retina TTAAACCTGG (2) 1.9 0.0019 Adult retinal TAGGAGGTAA (2) 16.7 0.0167 Adult retinal CTGGGGAAGA (7) 3.7 0.0037 Adult retinal AAGGGTCCTT (2) 1.9 0.0019 Adult retinal GCTTCCCTTT (7) 1.9 0.0019 Adult retinal TGAGTTCTGG (3) 1.9 0.0019 Adult retinal TTAAACCTGG (2) 1.9 0.0019 ONL CCTTTGATCC (22) 5.7 0.0057 ONL GCTTCCCTTT (7) 5.7 0.0057 ONL AAGAAAGGAG (4) 1.9 0.0019 ONL AAGGGTCCTT (2) 1.9 0.0019 ONL TAGGAGGTAA (2) 1.9 0.0019