Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.218423
Riok2
RIO kinase 2 (yeast)
17
17
67045
Gene Ontology
kinase activity
Human Homolog
RIOK2[RIO kinase 2 (yeast)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 13 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 32 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAATAAATAA
(
12
)
19.6
0.0196
Cb medulloblastoma
TAATAAATAA
(
12
)
6.9
0.0069
Cb medulloblastoma
TGTAAAAATA
(
4
)
2.3
0.0023
P8 GC+1d culture
TAATAAATAA
(
12
)
32
0.032
P8 GC+SHH+1d culture
TAATAAATAA
(
12
)
32.8
0.0328
P8 GC+SHH+1d culture
TTTTCCCTCC (
2
)
1.2
0.0012
Hypothalamus
TAATAAATAA
(
12
)
43.5
0.0435
E12.5 retina
TAATAAATAA
(
12
)
39.4
0.0394
E14.5 retina
TAATAAATAA
(
12
)
60.1
0.0601
E14.5 retina
GAGGTGCACG
1.8
0.0018
E14.5 retina
TAAGCCAGCC (
3
)
1.8
0.0018
E16.5 retina
TAATAAATAA
(
12
)
36.2
0.0362
E18.5 retina
TAATAAATAA
(
12
)
92.8
0.0928
E18.5 retina
TGTAAAAATA
(
4
)
1.8
0.0018
P0.5 retina
TAATAAATAA
(
12
)
27.5
0.0275
P0.5 retina
GAGGTGCACG
2
0.002
P0.5 retina
TAAGCCAGCC (
3
)
2
0.002
P2.5 retina
TAATAAATAA
(
12
)
72.2
0.0722
P2.5 retina
GAGGTGCACG
3.5
0.0035
P4.5 retina
TAATAAATAA
(
12
)
77.3
0.0773
P4.5 retina
TAAGCCAGCC (
3
)
2
0.002
P6.5 retina
TAATAAATAA
(
12
)
68.4
0.0684
P6.5 retina
GAGGTGCACG
1.7
0.0017
P10.5 crx- retina
TAATAAATAA
(
12
)
11.1
0.0111
P10.5 crx+ retina
TAATAAATAA
(
12
)
15.4
0.0154
P10.5 crx+ retina
TGTAAAAATA
(
4
)
1.9
0.0019
P10.5 crx+ retina
TTTTCCCTCC (
2
)
1.9
0.0019
Adult retinal
TAATAAATAA
(
12
)
5.6
0.0056
ONL
TAATAAATAA
(
12
)
23
0.023
ONL
GAGGTGCACG
1.9
0.0019
ONL
TAAGCCAGCC (
3
)
1.9
0.0019
ONL
TTTTCCCTCC (
2
)
1.9
0.0019
