Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.218434	1810034M08Rik	RIKEN cDNA 1810034M08 gene	6		69786
Gene Ontology	biological_process unknown | cellular_component unknown | protein kinase binding
Human Homolog	CGI-121[CGI-121 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 95 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GAAGGTTCTA (3) 4.9 0.0049 P8 Cb GC GTCTACAGAG (15) 4.9 0.0049 P8 Cb GC GAAGTGGCAG (3) 1.6 0.0016 P8 Cb GC TTTGATGGTT (3) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CTCCTGTCTT (2) 9.2 0.0092 Cb medulloblastoma GAAGGTTCTA (3) 6.9 0.0069 Cb medulloblastoma GTCTACAGAG (15) 2.3 0.0023 Cb medulloblastoma TTTGATGGTT (3) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GTCTACAGAG (15) 3.4 0.0034 P8 GC+1d culture CTCCTGTCTT (2) 2.3 0.0023 P8 GC+1d culture CCCTTAATCC (7) 1.1 0.0011 P8 GC+1d culture GAAGGTTCTA (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture GAAGGTTCTA (3) 7 0.007 P8 GC+SHH+1d culture CTCCTGTCTT (2) 4.7 0.0047 P8 GC+SHH+1d culture GTCTACAGAG (15) 2.3 0.0023 P8 GC+SHH+1d culture TTTGATGGTT (3) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts CTCCTGTCTT (2) 7 0.007 3T3 fibroblasts GAAGGTTCTA (3) 3.5 0.0035 3T3 fibroblasts GTCTACAGAG (15) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex CCTTAAATCC (3) 9.9 0.0099 E15 cortex GAAGGTTCTA (3) 4.9 0.0049 E15 cortex GTCTACAGAG (15) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GTCTACAGAG (15) 13.6 0.0136 P1 cortex GAAGGTTCTA (3) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GAAGGTTCTA (3) 5.4 0.0054 Hypothalamus CTCCTGTCTT (2) 3.6 0.0036 Hypothalamus GTCTACAGAG (15) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GAAGGTTCTA (3) 15 0.015 E12.5 retina GAAGTGGCAG (3) 3.8 0.0038 E12.5 retina CCTTAAATCC (3) 1.9 0.0019 E12.5 retina CTCCTGTCTT (2) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GAAGGTTCTA (3) 7.3 0.0073 E14.5 retina GTCTACAGAG (15) 7.3 0.0073 E14.5 retina CTCCTGTCTT (2) 3.6 0.0036 E14.5 retina CCCTTAATCC (7) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GAAGGTTCTA (3) 7.2 0.0072 E16.5 retina CTCCTGTCTT (2) 5.4 0.0054 E16.5 retina GAAGTGGCAG (3) 1.8 0.0018 E16.5 retina GTCTACAGAG (15) 1.8 0.0018 E16.5 retina TTTGATGGTT (3) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina GAAGGTTCTA (3) 10.9 0.0109 E18.5 retina GTCTACAGAG (15) 5.5 0.0055 E18.5 retina GAAGTGGCAG (3) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GAAGGTTCTA (3) 11.8 0.0118 P0.5 retina CCCTTAATCC (7) 3.9 0.0039 P0.5 retina CTCCTGTCTT (2) 3.9 0.0039 P0.5 retina GTCTACAGAG (15) 3.9 0.0039 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GAAGGTTCTA (3) 8.8 0.0088 P2.5 retina CTCCTGTCTT (2) 7 0.007 P2.5 retina CCCTTAATCC (7) 1.8 0.0018 P2.5 retina CCTTAAATCC (3) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CTCCTGTCTT (2) 11.9 0.0119 P4.5 retina GTCTACAGAG (15) 7.9 0.0079 P4.5 retina GAAGGTTCTA (3) 4 0.004 P4.5 retina CCCTTAATCC (7) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CTCCTGTCTT (2) 6.7 0.0067 P6.5 retina AAGATGGAAG (3) 5 0.005 P6.5 retina GAAGGTTCTA (3) 5 0.005 P6.5 retina GTCTACAGAG (15) 5 0.005 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CTCCTGTCTT (2) 5.6 0.0056 P10.5 crx- retina GTCTACAGAG (15) 3.7 0.0037 P10.5 crx- retina GAAGGTTCTA (3) 1.9 0.0019 P10.5 crx- retina GAAGTGGCAG (3) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GTCTACAGAG (15) 7.7 0.0077 P10.5 crx+ retina CTCCTGTCTT (2) 3.8 0.0038 P10.5 crx+ retina GAAGGTTCTA (3) 3.8 0.0038 P10.5 crx+ retina GAAGTGGCAG (3) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal GTCTACAGAG (15) 3.7 0.0037 Adult retinal CCTTAAATCC (3) 1.9 0.0019 Adult retinal CTCCTGTCTT (2) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GTCTACAGAG (15) 11.5 0.0115 ONL CCCTTAATCC (7) 7.7 0.0077 ONL CCTTAAATCC (3) 3.8 0.0038 ONL CTCCTGTCTT (2) 3.8 0.0038 ONL GAAGGTTCTA (3) 1.9 0.0019