Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.218473	Tde1	tumor differentially expressed 1	2		26943
Mm.218473	0610039K10Rik	RIKEN cDNA 0610039K10 gene	2		68386
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 119 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAGTTTATT (6) 19.6 0.0196 P8 Cb GC ACCAATGAAC (5) 4.9 0.0049 P8 Cb GC ATGACAGAAG (6) 1.6 0.0016 P8 Cb GC ATGGACTTTA (13) 1.6 0.0016 P8 Cb GC GTGACGCCGG (2) 1.6 0.0016 Cb medulloblastoma ACCAATGAAC (5) 434.7 0.4347 Cb medulloblastoma TCAGTTTATT (6) 27.7 0.0277 Cb medulloblastoma TGTCAAAGCA (3) 4.6 0.0046 Cb medulloblastoma AACTACAGCT (3) 2.3 0.0023 Cb medulloblastoma ATCAATGAAC (4) 2.3 0.0023 Cb medulloblastoma CCTTTGACTT (3) 2.3 0.0023 Cb medulloblastoma CCTTTTGGGT (4) 2.3 0.0023 Cb medulloblastoma GTGACGCCGG (2) 2.3 0.0023 P8 GC+1d culture TCAGTTTATT (6) 29.7 0.0297 P8 GC+1d culture ACCAATGAAC (5) 16 0.016 P8 GC+1d culture TGTCAAAGCA (3) 4.6 0.0046 P8 GC+1d culture AACTACAGCT (3) 3.4 0.0034 P8 GC+1d culture ATGACAGAAG (6) 2.3 0.0023 P8 GC+1d culture ATGGACTTTA (13) 2.3 0.0023 P8 GC+1d culture ACCAAAGAAA (4) 1.1 0.0011 P8 GC+1d culture AGCTCAGTGT (3) 1.1 0.0011 P8 GC+1d culture CCTTTGACTT (3) 1.1 0.0011 P8 GC+1d culture TACTTTTGGA (4) 1.1 0.0011 P8 GC+SHH+1d culture TCAGTTTATT (6) 28.1 0.0281 P8 GC+SHH+1d culture AACTACAGCT (3) 3.5 0.0035 P8 GC+SHH+1d culture ACCAATGAAC (5) 3.5 0.0035 P8 GC+SHH+1d culture ACCAAAGAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture ATGACAGAAG (6) 1.2 0.0012 P8 GC+SHH+1d culture ATGGACTTTA (13) 1.2 0.0012 P8 GC+SHH+1d culture TGAGGCCTTT (3) 1.2 0.0012 P8 GC+SHH+1d culture TGTCAAAGCA (3) 1.2 0.0012 P8 GC+SHH+1d culture TTAAAAAACA (4) 1.2 0.0012 P8 GC+SHH+1d culture TTAAAACAAA (3) 1.2 0.0012 3T3 fibroblasts AACTACAGCT (3) 7 0.007 E15 cortex AGAAGGAGGG (3) 4.9 0.0049 E15 cortex ATGACAGAAG (6) 4.9 0.0049 P1 cortex AGAAGGAGGG (3) 9.1 0.0091 P1 cortex AACTACAGCT (3) 4.5 0.0045 P1 cortex ACCAATGAAC (5) 4.5 0.0045 P1 cortex ATGACAGAAG (6) 4.5 0.0045 P1 cortex TCAGTTTATT (6) 4.5 0.0045 Hypothalamus ACCAATGAAC (5) 831.3 0.8313 Hypothalamus TCAGTTTATT (6) 19.9 0.0199 Hypothalamus TACTTTTGGA (4) 1.8 0.0018 E12.5 retina TCAGTTTATT (6) 11.3 0.0113 E12.5 retina ACCAATGAAC (5) 5.6 0.0056 E12.5 retina ATGTACAAGG (2) 1.9 0.0019 E12.5 retina ATTTTTGTGT (3) 1.9 0.0019 E14.5 retina TCAGTTTATT (6) 25.5 0.0255 E14.5 retina ACCAATGAAC (5) 3.6 0.0036 E14.5 retina ATGACAGAAG (6) 3.6 0.0036 E14.5 retina AACTACAGCT (3) 1.8 0.0018 E14.5 retina ATTTTTGTGT (3) 1.8 0.0018 E14.5 retina TGAGGCCTTT (3) 1.8 0.0018 E14.5 retina TTAAAAAACA (4) 1.8 0.0018 E14.5 retina TTAAAACAAA (3) 1.8 0.0018 E16.5 retina TCAGTTTATT (6) 14.5 0.0145 E16.5 retina GTGACGCCGG (2) 3.6 0.0036 E16.5 retina ACCAATGAAC (5) 1.8 0.0018 E16.5 retina AGCTCAGTGT (3) 1.8 0.0018 E16.5 retina ATGACAGAAG (6) 1.8 0.0018 E16.5 retina TACTTTTGGA (4) 1.8 0.0018 E16.5 retina TGTCAAAGCA (3) 1.8 0.0018 E16.5 retina TTAAAAAACA (4) 1.8 0.0018 E18.5 retina TCAGTTTATT (6) 10.9 0.0109 E18.5 retina ACCAATGAAC (5) 3.6 0.0036 E18.5 retina GTGACGCCGG (2) 1.8 0.0018 E18.5 retina TGTCAAAGCA (3) 1.8 0.0018 P0.5 retina AGCTCAGTGT (3) 5.9 0.0059 P0.5 retina GGCAGCCCCT (4) 5.9 0.0059 P0.5 retina TCAGTTTATT (6) 3.9 0.0039 P0.5 retina ATGACAGAAG (6) 2 0.002 P0.5 retina ATGTACAAGG (2) 2 0.002 P0.5 retina TTAAAACAAA (3) 2 0.002 P2.5 retina TCAGTTTATT (6) 21.1 0.0211 P2.5 retina ACCAATGAAC (5) 5.3 0.0053 P2.5 retina TCAATTTATT (3) 3.5 0.0035 P2.5 retina ATGACAGAAG (6) 1.8 0.0018 P2.5 retina ATGGACTTTA (13) 1.8 0.0018 P2.5 retina CCTTTTGGGT (4) 1.8 0.0018 P2.5 retina TGAGGCCTTT (3) 1.8 0.0018 P4.5 retina TCAGTTTATT (6) 29.7 0.0297 P4.5 retina ACCAATGAAC (5) 4 0.004 P4.5 retina ACCAAAGAAA (4) 2 0.002 P4.5 retina TCAATTTATT (3) 2 0.002 P4.5 retina TGAGGCCTTT (3) 2 0.002 P4.5 retina TTAAAACAAA (3) 2 0.002 P6.5 retina TCAGTTTATT (6) 25 0.025 P6.5 retina ACCAATGAAC (5) 13.3 0.0133 P6.5 retina ATGACAGAAG (6) 5 0.005 P6.5 retina ATGGACTTTA (13) 1.7 0.0017 P6.5 retina ATGTACAAGG (2) 1.7 0.0017 P6.5 retina TGTCAAAGCA (3) 1.7 0.0017 P10.5 crx- retina TCAGTTTATT (6) 31.6 0.0316 P10.5 crx- retina TACTTTTGGA (4) 7.4 0.0074 P10.5 crx- retina ATGACAGAAG (6) 3.7 0.0037 P10.5 crx- retina CCTTTTGGGT (4) 1.9 0.0019 P10.5 crx+ retina ACCAATGAAC (5) 9.6 0.0096 P10.5 crx+ retina TCAGTTTATT (6) 7.7 0.0077 P10.5 crx+ retina TACTTTTGGA (4) 3.8 0.0038 P10.5 crx+ retina ATGACAGAAG (6) 1.9 0.0019 P10.5 crx+ retina CCTTTTGGGT (4) 1.9 0.0019 P10.5 crx+ retina GCTACACTCT (7) 1.9 0.0019 P10.5 crx+ retina TGTCAAAGCA (3) 1.9 0.0019 P10.5 crx+ retina TTAAAAAACA (4) 1.9 0.0019 Adult retinal ACCAATGAAC (5) 46.3 0.0463 Adult retinal TCAGTTTATT (6) 5.6 0.0056 Adult retinal ATTTTTGTGT (3) 3.7 0.0037 Adult retinal ACCAAAGAAA (4) 1.9 0.0019 Adult retinal CCTTTTGGGT (4) 1.9 0.0019 Adult retinal TACTTTTGGA (4) 1.9 0.0019 ONL TCAGTTTATT (6) 11.5 0.0115 ONL ACCAATGAAC (5) 9.6 0.0096 ONL AACTACAGCT (3) 7.7 0.0077 ONL CCTTTGACTT (3) 3.8 0.0038 ONL TACTTTTGGA (4) 3.8 0.0038 ONL ATGACAGAAG (6) 1.9 0.0019 ONL ATTTTTGTGT (3) 1.9 0.0019 ONL TTAAAACAAA (3) 1.9 0.0019