Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21874	Psmb3	proteasome (prosome, macropain) subunit, beta type 3	11	11 58.3 cM	26446
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | peptidase activity | proteasome core complex (sensu Eukarya) | protein catabolism | ubiquitin-dependent protein catabolism
Human Homolog	PSMB3[proteasome (prosome, macropain) subunit, beta type, 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCGTCATCG (3) 45.7 0.0457 P8 Cb GC TAGGCAAAAC (2) 11.4 0.0114 P8 Cb GC GGGGTTTTTA 3.3 0.0033 P8 Cb GC GGGATGCTCT (3) 1.6 0.0016 Cb medulloblastoma GGCGTCATCG (3) 30.1 0.0301 Cb medulloblastoma GCCTAAAAAA 2.3 0.0023 Cb medulloblastoma GGCTTTATTT 2.3 0.0023 Cb medulloblastoma TAGGCAAAAC (2) 2.3 0.0023 P8 GC+1d culture GGCGTCATCG (3) 21.7 0.0217 P8 GC+1d culture GGGATGCTCT (3) 6.8 0.0068 P8 GC+1d culture TAGGCAAAAC (2) 1.1 0.0011 P8 GC+SHH+1d culture GGCGTCATCG (3) 28.1 0.0281 P8 GC+SHH+1d culture GGGATGCTCT (3) 3.5 0.0035 P8 GC+SHH+1d culture GTGACTGATG (2) 1.2 0.0012 P8 GC+SHH+1d culture TTGGGCTCCC 1.2 0.0012 3T3 fibroblasts GGCGTCATCG (3) 42.1 0.0421 3T3 fibroblasts GGGATGCTCT (3) 3.5 0.0035 3T3 fibroblasts GTGACTGATG (2) 3.5 0.0035 E15 cortex GGCGTCATCG (3) 29.7 0.0297 E15 cortex GGGATGCTCT (3) 9.9 0.0099 E15 cortex GGGGTCATCG 4.9 0.0049 P1 cortex GGGATGCTCT (3) 9.1 0.0091 P1 cortex GGCGTCATCG (3) 4.5 0.0045 P1 cortex GTGACTGATG (2) 4.5 0.0045 Hypothalamus GGCGTCATCG (3) 14.5 0.0145 Hypothalamus GGCTTTATTT 3.6 0.0036 Hypothalamus TAGGCAAAAC (2) 1.8 0.0018 E12.5 retina GGCGTCATCG (3) 28.2 0.0282 E12.5 retina GCCTAAAAAA 1.9 0.0019 E12.5 retina GCGGCCCACC 1.9 0.0019 E12.5 retina GTGACTGATG (2) 1.9 0.0019 E12.5 retina TAGGCAAAAC (2) 1.9 0.0019 E12.5 retina TTGGGCTCCC 1.9 0.0019 E14.5 retina GGCGTCATCG (3) 12.8 0.0128 E14.5 retina TAGGCAAAAC (2) 5.5 0.0055 E14.5 retina GGGGTTTTTA 1.8 0.0018 E14.5 retina TTGGGCTCCC 1.8 0.0018 E16.5 retina GGCGTCATCG (3) 19.9 0.0199 E16.5 retina GGCTTTATTT 5.4 0.0054 E16.5 retina GGGATGCTCT (3) 1.8 0.0018 E16.5 retina GTGACTGATG (2) 1.8 0.0018 E16.5 retina TAGGCAAAAC (2) 1.8 0.0018 E18.5 retina GGCGTCATCG (3) 16.4 0.0164 E18.5 retina TAGGCAAAAC (2) 7.3 0.0073 E18.5 retina GGCATTTTTT 5.5 0.0055 E18.5 retina GCCTAAAAAA 3.6 0.0036 E18.5 retina GGGATGCTCT (3) 3.6 0.0036 E18.5 retina GCGGCCCACC 1.8 0.0018 E18.5 retina TTGGGCTCCC 1.8 0.0018 P0.5 retina GGCGTCATCG (3) 41.2 0.0412 P0.5 retina GGGGTTTTTA 5.9 0.0059 P0.5 retina GGGATGCTCT (3) 3.9 0.0039 P0.5 retina TAGGCAAAAC (2) 2 0.002 P2.5 retina GGCGTCATCG (3) 15.8 0.0158 P2.5 retina GGGATGCTCT (3) 5.3 0.0053 P2.5 retina TAGGCAAAAC (2) 1.8 0.0018 P4.5 retina GGCGTCATCG (3) 23.8 0.0238 P4.5 retina GGCTTTATTT 4 0.004 P4.5 retina GGGATGCTCT (3) 4 0.004 P4.5 retina GGGGTCATCG 2 0.002 P4.5 retina TAGGCAAAAC (2) 2 0.002 P4.5 retina TTGGGCTCCC 2 0.002 P6.5 retina GGCGTCATCG (3) 16.7 0.0167 P6.5 retina GGCTTCTTCT (2) 5 0.005 P6.5 retina TAGGCAAAAC (2) 5 0.005 P6.5 retina GGGATGCTCT (3) 3.3 0.0033 P6.5 retina GCGGCCCACC 1.7 0.0017 P6.5 retina GGGGTCATCG 1.7 0.0017 P6.5 retina TTGGGCTCCC 1.7 0.0017 P10.5 crx- retina GGCGTCATCG (3) 52 0.052 P10.5 crx- retina GGCTTTATTT 1.9 0.0019 P10.5 crx- retina TTGGGCTCCC 1.9 0.0019 P10.5 crx+ retina GGCGTCATCG (3) 30.8 0.0308 P10.5 crx+ retina GGGATGCTCT (3) 9.6 0.0096 P10.5 crx+ retina TAGGCAAAAC (2) 3.8 0.0038 P10.5 crx+ retina GGGGTCATCG 1.9 0.0019 P10.5 crx+ retina TTGGGCTCCC 1.9 0.0019 Adult retinal GGCGTCATCG (3) 14.8 0.0148 Adult retinal TAGGCAAAAC (2) 1.9 0.0019 ONL GGCGTCATCG (3) 11.5 0.0115 ONL TAGGCAAAAC (2) 7.7 0.0077 ONL GCGGCCCACC 1.9 0.0019