Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.218889	1110001C20Rik	RIKEN cDNA 1110001C20 gene	4		242291
Human Homolog	FLJ20421[hypothetical protein FLJ20421]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCCAATTCT CTCTTATATG GTCAATTAAC TCAACGCAGA TCTGAAAAAA (2) TCTGAAAAGG (2) 19.6 0.0196 Cb medulloblastoma GTCAATTAAC TAAATTGTTC TCTGAAAAAA (2) TCTGAAAAGG (2) TGGCTTTGAT (3) 34.7 0.0347 P8 GC+1d culture ATCCAATTCT ATGTATATAA TAAATTGTTC TCTGAAAAAA (2) TCTGAAAAGG (2) TGGCTTTGAT (3) 18.2 0.0182 P8 GC+SHH+1d culture ATCCAATTCT CTCTTATATG TAAATTGTTC TCTGAAAAAA (2) TCTGAAAAGG (2) TGGCTTTGAT (3) 21.1 0.0211 3T3 fibroblasts GTCAATTAAC TCAACGCAGA TCTGAAAAGG (2) TGGCTTTGAT (3) 17.5 0.0175 E15 cortex GTCAATTAAC TCTGAAAAAA (2) TCTGAAAAGG (2) 14.7 0.0147 P1 cortex CTCTTATATG TCTGAAAAGG (2) 22.7 0.0227 Hypothalamus TAAATGTTCT (2) TAAATTGTTC TCTGAAAAAA (2) TCTGAAAAGG (2) TGGCTTTGAT (3) TTAACTTAGT 21.6 0.0216 E12.5 retina CGTGCACCGT TAAATGTTCT (2) TCTGAAAAAA (2) TCTGAAAAGG (2) TGGCTTTGAT (3) 18.8 0.0188 E14.5 retina CGTGCACCGT TCTGAAAAAA (2) TCTGAAAAGG (2) 10.9 0.0109 E16.5 retina TCTGAAAAAA (2) TCTGAAAAGG (2) TTAACTTAGT 10.8 0.0108 E18.5 retina TCTGAAAAAA (2) TCTGAAAAGG (2) TGGCTTTGAT (3) 18.2 0.0182 P0.5 retina GATGGAGATG (2) TCTGAAAAGG (2) TGGCTTTGAT (3) 7.9 0.0079 P2.5 retina CTCTTATATG TAAATTGTTC TCTGAAAAAA (2) TCTGAAAAGG (2) TGGCTTTGAT (3) 21.2 0.0212 P4.5 retina GATGGAGATG (2) TAAATGTTCT (2) TAAATTGTTC TCTGAAAAGG (2) TTAACTTAGT 13.9 0.0139 P6.5 retina CGTGCACCGT GATGGAGATG (2) GTCAATTAAC TAAATTGTTC TCTGAAAAGG (2) TGGCTTTGAT (3) 15.1 0.0151 P10.5 crx- retina ATGTATATAA GTCAATTAAC TCTGAAAAAA (2) TCTGAAAAGG (2) 18.6 0.0186 P10.5 crx+ retina TCTGAAAAAA (2) TCTGAAAAGG (2) 5.7 0.0057 Adult retinal GTCAATTAAC TCAACGCAGA TCTGAAAAAA (2) TGGCTTTGAT (3) 7.6 0.0076 ONL ATCCAATTCT TCTGAAAAGG (2) 3.8 0.0038