Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21911	Smfn	small fragment nuclease	9		104444
Gene Ontology	3'-5' exonuclease activity | hydrolase activity | manganese ion binding | mitochondrion | mitochondrion | nuclease activity | nucleobase, nucleoside, nucleotide and nucleic acid metabolism | nucleotide metabolism | nucleus
Human Homolog	DKFZP566E144[small fragment nuclease]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 32 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTTCATACA (2) 4.9 0.0049 P8 Cb GC TGGAACAATG (2) 4.9 0.0049 P8 Cb GC AAACATCTTC (2) 1.6 0.0016 Cb medulloblastoma TGGAACAATG (2) 20.8 0.0208 Cb medulloblastoma AAACATCTTC (2) 4.6 0.0046 Cb medulloblastoma GCACTGGATG (3) 4.6 0.0046 P8 GC+1d culture TGGAACAATG (2) 5.7 0.0057 P8 GC+1d culture CTTTCATACA (2) 2.3 0.0023 P8 GC+SHH+1d culture TGGAACAATG (2) 7 0.007 3T3 fibroblasts AAACATCTTC (2) 3.5 0.0035 P1 cortex AATGTGGATG 4.5 0.0045 P1 cortex GCACTGGATG (3) 4.5 0.0045 Hypothalamus TGGAACAATG (2) 7.2 0.0072 Hypothalamus AATGTGGATG 5.4 0.0054 Hypothalamus AAACATCTTC (2) 1.8 0.0018 E12.5 retina TGGAACAATG (2) 1.9 0.0019 E14.5 retina AAACATCTTC (2) 1.8 0.0018 E16.5 retina TGGAACAATG (2) 1.8 0.0018 E18.5 retina TGGAACAATG (2) 3.6 0.0036 P0.5 retina TGGAACAATG (2) 5.9 0.0059 P2.5 retina TGGAACAATG (2) 10.6 0.0106 P4.5 retina TGGAACAATG (2) 4 0.004 P4.5 retina AATGTGGATG 2 0.002 P6.5 retina TGGAACAATG (2) 1.7 0.0017 P10.5 crx- retina TGGAACAATG (2) 3.7 0.0037 P10.5 crx- retina AAACATCTTC (2) 1.9 0.0019 P10.5 crx- retina AATGTGGATG 1.9 0.0019 P10.5 crx+ retina TGGAACAATG (2) 7.7 0.0077 P10.5 crx+ retina AAACATCTTC (2) 1.9 0.0019 P10.5 crx+ retina AATGTGGATG 1.9 0.0019 Adult retinal AAACATCTTC (2) 1.9 0.0019 ONL AATGTGGATG 1.9 0.0019