Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.219245	Scoc	short coiled-coil protein	8		56367
Human Homolog	SCOC[short coiled-coil protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 122 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATTTGAAAA (2) CGCAGGGGCG GCTCTCCAGC (2) GGACTTCTTT GGATGGCTTA (3) GTGGAAAAAA 73.4 0.0734 Cb medulloblastoma AATATAAGAG CATTTGAAAA (2) GATGGCTTAT GCTCTCCAGC (2) GGATGGCTTA (3) TAGAGACTTT 178 0.178 P8 GC+1d culture CATTTGAAAA (2) CCCATTATTC GCCTCTTTTC GCTCTCCAGC (2) GTGGAAAAAA TACTGAATGC 80.9 0.0809 P8 GC+SHH+1d culture AATATAAGAG CATTTGAAAA (2) CCCATTATTC CGCAGGGGCG GCTCTCCAGC (2) GGATGGCTTA (3) GGGGCCTCCC TGGATGGAGA 90.2 0.0902 3T3 fibroblasts GCCTCTTTTC GCTCTCCAGC (2) GGACTTCTTT 35 0.035 E15 cortex GCTCTCCAGC (2) GGATGGCTTA (3) 89.1 0.0891 P1 cortex AATATAAGAG GCTCTCCAGC (2) GTGGAAAAAA 72.6 0.0726 Hypothalamus AATATAAGAG CATTTGAAAA (2) CGCAGGGGCG GATGGCTTAT GCTCTCCAGC (2) GCTCTTCGGG GTGGAAAAAA TAGAGACTTT 106.8 0.1068 E12.5 retina CATTTGAAAA (2) GCTCTCCAGC (2) GGATGGCTTA (3) 82.7 0.0827 E14.5 retina CATTTGAAAA (2) CGCAGGGGCG GCTCTCCAGC (2) GGATGGCTTA (3) GTGGAAAAAA TGCACTCGTT TGGATGGAGA 101.9 0.1019 E16.5 retina AATATAAGAG CATTTGAAAA (2) CCCATTATTC CGCAGGGGCG GCTCTCCAGC (2) GCTCTTCGGG GTGGAAAAAA TACTGAATGC TGGATGGAGA 133.9 0.1339 E18.5 retina AATATAAGAG CATTTGAAAA (2) GCTCTCCAGC (2) GTGGAAAAAA 145.5 0.1455 P0.5 retina AATATAAGAG CATTTGAAAA (2) CCCATTATTC GCCTCTTTTC GCTCTCCAGC (2) GTGGAAAAAA TAGAGACTTT TGCACTCGTT 92.4 0.0924 P2.5 retina AATATAAGAG CATTTGAAAA (2) GCTCTCCAGC (2) GCTCTGCATC GCTTTCCAGC TCTGCTTCTA TGCACTCGTT TGGATGGAGA 104.1 0.1041 P4.5 retina AATATAAGAG CATTTGAAAA (2) CGCAGGGGCG GCTCTCCAGC (2) GGATGGCTTA (3) GTGGAAAAAA 91.1 0.0911 P6.5 retina AATATAAGAG CATTTGAAAA (2) CGCAGGGGCG GCTCTCCAGC (2) GCTCTGCATC GTGGAAAAAA TGGATGGAGA 113.3 0.1133 P10.5 crx- retina AATATAAGAG CATTTGAAAA (2) CCCATTATTC CGCAGGGGCG GCTCTCCAGC (2) GCTCTGCATC TACTGAATGC 89.3 0.0893 P10.5 crx+ retina GCTCTCCAGC (2) GCTCTGCATC GGGGCCTCCC GTGGAAAAAA TAGAGACTTT TCTGCTTCTA TGCACTCGTT TGGATGGAGA 111.3 0.1113 Adult retinal CATTTGAAAA (2) GCTCTCCAGC (2) GCTCTTCGGG GGACTTCTTT GGGGCCTCCC GTGGAAAAAA TCTGCTTCTA TGCACTCGTT 79.9 0.0799 ONL AATATAAGAG CATTTGAAAA (2) GCTCTCCAGC (2) GCTTTCCAGC GGGGCCTCCC 42 0.042