Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21961	Atp6ap1	ATPase, H+ transporting, lysosomal accessory protein 1	X	X 29.83 cM	54411
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | extracellular space | hydrogen ion transporter activity | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | integral to membrane | proton transport | proton-transporting two-sector ATPase complex
Human Homolog	ATP6AP1[ATPase, H+ transporting, lysosomal accessory protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACTTGAGGT 3.3 0.0033 Cb medulloblastoma GAGGATTCCA GCTGTTGCTG (2) GTGGCTGGGG 6.9 0.0069 P8 GC+1d culture AACTTGAGGT GCTGGTTGAT 4.5 0.0045 P8 GC+SHH+1d culture ACACTGCCCA ACACTGTCAC 7 0.007 3T3 fibroblasts AACTTGAGGT ACACTGCCCA GTGGCCTTGG 24.5 0.0245 E15 cortex ACACTGCCCA 4.9 0.0049 P1 cortex AACTTGAGGT ACACTGCCCA ACACTGTCAC GAGGATTCCA TGGTTGTCTC 27.1 0.0271 Hypothalamus AACTTGAGGT GAACGACTTG GCTGGTTGAT 5.4 0.0054 E12.5 retina ACACTGCCCA ACACTGTCAC GAGCTGGGTC (2) 7.6 0.0076 E14.5 retina ACACTGTCAC GAGGATTCCA GGGGGGCTGG GGTGGGCCTG 12.7 0.0127 E16.5 retina ACACTGCCCA ACACTGTCAC 7.2 0.0072 E18.5 retina AACTTGAGGT ACACTGTCAC GAGCTGGGTC (2) GGGGGGCTGG GGTGGGCCTG 9 0.009 P0.5 retina ACACTGCCCA GGGGGGCTGG TGGTTGTCTC 6 0.006 P2.5 retina AACTTGAGGT ACACTGCCCA ACACTGTCAC GCTGGTTGAT GGTGGGCCTG TGGTTGTCTC 10.8 0.0108 P6.5 retina AACTTGAGGT ACACTGTCAC GAGCTGGGTC (2) GCTGGTTGAT GCTGTTGCTG (2) TGGTTGTCTC 16.7 0.0167 P10.5 crx- retina AACTTGAGGT ACACTGCCCA ACACTGTCAC GCTGTTGCTG (2) GTGGCTGGGG 13.2 0.0132 P10.5 crx+ retina AACTTGAGGT ACACTGTCAC GAGCTGGGTC (2) GTGGCTGGGG 13.4 0.0134 Adult retinal AACTTGAGGT ACACTGCCCA ACACTGTCAC GAACGACTTG GCTGGTTGAT GCTGTTGCTG (2) TGGTTGTCTC 18.8 0.0188 ONL AACTTGAGGT GGGGGGCTGG 9.6 0.0096