Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.219613	Trim8	tripartite motif protein 8	19		93679
Gene Ontology	intracellular | nucleus | protein binding | protein ubiquitination | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	TRIM8[tripartite motif-containing 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCGGCTGCGG (3) GCTGGAAGAA GGGGTGTGAA (2) 6.5 0.0065 Cb medulloblastoma GCTGGAAGAA 2.3 0.0023 P8 GC+1d culture CTCCCCCAGT GCGGCTGCGG (3) GCTGGAAGAA GGGGTGTGAA (2) 13.7 0.0137 P8 GC+SHH+1d culture GCGGCTGCGG (3) GCTGGAAGAA GGGGTGTGAA (2) 10.5 0.0105 3T3 fibroblasts GCGGCTGCGG (3) GCTGGAAGAA GGGGTGTGAA (2) 14 0.014 E15 cortex GCTGGAAGAA GGGGTGTGAA (2) 9.8 0.0098 P1 cortex GCTGGAAGAA 9.1 0.0091 Hypothalamus GCTGGAAGAA GGGGTGTGAA (2) 5.4 0.0054 E12.5 retina GGGGTGTGAA (2) 3.8 0.0038 E16.5 retina GGGGTGTGAA (2) 3.6 0.0036 E18.5 retina GGGGTGTGAA (2) 1.8 0.0018 P0.5 retina GCTGGAAGAA 5.9 0.0059 P2.5 retina GCGGCTGCGG (3) GGGGTGTGAA (2) 3.6 0.0036 P4.5 retina CTCCCCCAGT GCTGGAAGAA GGGGTGTGAA (2) 8 0.008 P6.5 retina GCTGGAAGAA 3.3 0.0033 P10.5 crx- retina GCTGGAAGAA GGGGTGTGAA (2) 3.8 0.0038 P10.5 crx+ retina GGGGTGTGAA (2) 3.8 0.0038 Adult retinal CTCCCCCAGT GCTGGAAGAA 3.8 0.0038 ONL GCGGCTGCGG (3) 1.9 0.0019