Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.219666
5430417L22Rik
RIKEN cDNA 5430417L22 gene
2
108676
Mm.219666
A430105I19Rik
RIKEN cDNA A430105I19 gene
2
214239
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGGACTTTT
1.6
0.0016
Cb medulloblastoma
ACCAGAGACA
(
2
)
GGGGACTTTT
GTAGGGGTCT
16.1
0.0161
P8 GC+1d culture
ACCAGAGACA
(
2
)
GGGGACTTTT
TCTGGCCACT
(
2
)
5.7
0.0057
P8 GC+SHH+1d culture
ACCAGAGACA
(
2
)
GGGGACTTTT
GTAGGGGTCT
TCTGGCCACT
(
2
)
8.1
0.0081
E15 cortex
GGGGACTTTT
4.9
0.0049
P1 cortex
GTAGGGGTCT
4.5
0.0045
Hypothalamus
GTAGGGGTCT
TCTGGCCACT
(
2
)
3.6
0.0036
E12.5 retina
GGGGACTTTT
TCTGGCCACT
(
2
)
3.8
0.0038
E14.5 retina
ACCAGAGACA
(
2
)
GGGGACTTTT
3.6
0.0036
E16.5 retina
ACCAGAGACA
(
2
)
3.6
0.0036
E18.5 retina
ACCAGAGACA
(
2
)
1.8
0.0018
P0.5 retina
GGGGACTTTT
2
0.002
P2.5 retina
GGGGACTTTT
1.8
0.0018
P4.5 retina
ACCAGAGACA
(
2
)
GGGGACTTTT
GTAGGGGTCT
10
0.01
P6.5 retina
ACCAGAGACA
(
2
)
GGGGACTTTT
TCTGGCCACT
(
2
)
8.4
0.0084
P10.5 crx- retina
ACCAGAGACA
(
2
)
16.7
0.0167
P10.5 crx+ retina
ACCAGAGACA
(
2
)
GGGGACTTTT
TCTGGCCACT
(
2
)
7.6
0.0076
Adult retinal
GGGGACTTTT
TCTGGCCACT
(
2
)
5.6
0.0056
ONL
ACCAGAGACA
(
2
)
TCTGGCCACT
(
2
)
7.6
0.0076
