Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.220242	A930036I15Rik	RIKEN cDNA A930036I15 gene	3		77967
Mm.220242	Ank2	ankyrin 2, brain	3	3 62.5 cM	109676
Gene Ontology	apoptosis | cytoskeleton | regulation of apoptosis
Human Homolog	ANK2[ankyrin 2, neuronal] | ANK2[ankyrin 2, neuronal]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGTGTGCA (10) 8.2 0.0082 P8 Cb GC TCTGCTCTTC (4) 3.3 0.0033 P8 Cb GC AAACTTAAAA (7) 1.6 0.0016 P8 Cb GC GCTGCCCCAG (5) 1.6 0.0016 Cb medulloblastoma CCTGTGTGCA (10) 18.5 0.0185 Cb medulloblastoma AAAAGCCTTT (6) 2.3 0.0023 Cb medulloblastoma AGTGTTTTAA (4) 2.3 0.0023 Cb medulloblastoma TATTAGTTAT (2) 2.3 0.0023 P8 GC+1d culture CCTGTGTGCA (10) 13.7 0.0137 P8 GC+1d culture AAAAGCCTTT (6) 2.3 0.0023 P8 GC+1d culture GCTTCTCCCA (6) 2.3 0.0023 P8 GC+1d culture CCCTATGTCG (2) 1.1 0.0011 P8 GC+1d culture GCTGCCCCAG (5) 1.1 0.0011 P8 GC+1d culture TGTGTTTGTA (5) 1.1 0.0011 P8 GC+SHH+1d culture CCTGTGTGCA (10) 10.5 0.0105 P8 GC+SHH+1d culture TATTAGTTAT (2) 5.9 0.0059 P8 GC+SHH+1d culture AAAAGCCTTT (6) 1.2 0.0012 P8 GC+SHH+1d culture CCCTATGTCG (2) 1.2 0.0012 P8 GC+SHH+1d culture GCTTCTCCCA (6) 1.2 0.0012 P8 GC+SHH+1d culture TGTGTTTGTA (5) 1.2 0.0012 3T3 fibroblasts CCTGTGTGCA (10) 7 0.007 E15 cortex CCTGTGTGCA (10) 14.8 0.0148 E15 cortex CCCTATGTCG (2) 9.9 0.0099 E15 cortex GCTGCCCCAG (5) 9.9 0.0099 E15 cortex AGCTCCAGGG (7) 4.9 0.0049 E15 cortex GCTGCCCAGG (10) 4.9 0.0049 P1 cortex AAAAGCCTTT (6) 9.1 0.0091 P1 cortex TGTGTTTGTA (5) 9.1 0.0091 P1 cortex AGTGTTTTAA (4) 4.5 0.0045 P1 cortex CCTGTGTGCA (10) 4.5 0.0045 P1 cortex GCTGCCCCAG (5) 4.5 0.0045 P1 cortex TATTCTTGAA (4) 4.5 0.0045 P1 cortex TCTGCTCTTC (4) 4.5 0.0045 Hypothalamus CCTGTGTGCA (10) 5.4 0.0054 Hypothalamus TATTAGTTAT (2) 3.6 0.0036 Hypothalamus TCTGCTCTTC (4) 1.8 0.0018 E12.5 retina CCTGTGTGCA (10) 20.7 0.0207 E12.5 retina TCTGCTCTTC (4) 5.6 0.0056 E12.5 retina AAAAGCCTTT (6) 3.8 0.0038 E12.5 retina CCCTATGTCG (2) 1.9 0.0019 E12.5 retina GAATAAAAGC (3) 1.9 0.0019 E12.5 retina TTGCTCTCAG (4) 1.9 0.0019 E14.5 retina CCTGTGTGCA (10) 16.4 0.0164 E14.5 retina AGCTCCAGGG (7) 3.6 0.0036 E14.5 retina GAATAAAAGC (3) 3.6 0.0036 E14.5 retina GCTTCTCCCA (6) 1.8 0.0018 E14.5 retina TCACCCCAAA (3) 1.8 0.0018 E14.5 retina TCTGCTCCTC (5) 1.8 0.0018 E14.5 retina TGTGTTTGTA (5) 1.8 0.0018 E14.5 retina TTGCTCTCAG (4) 1.8 0.0018 E16.5 retina CCTGTGTGCA (10) 9.1 0.0091 E16.5 retina GCTTCTCCCA (6) 3.6 0.0036 E16.5 retina AGCTCCAGGG (7) 1.8 0.0018 E16.5 retina CCCTATGTCG (2) 1.8 0.0018 E16.5 retina GAATAAAAGC (3) 1.8 0.0018 E16.5 retina GCTGCCCAGG (10) 1.8 0.0018 E16.5 retina GCTGCCCCAG (5) 1.8 0.0018 E16.5 retina TATTAGTTAT (2) 1.8 0.0018 E18.5 retina CCTGTGTGCA (10) 7.3 0.0073 E18.5 retina TATTAGTTAT (2) 5.5 0.0055 E18.5 retina AAAAGCCTTT (6) 1.8 0.0018 E18.5 retina AAACTTAAAA (7) 1.8 0.0018 P0.5 retina CCTGTGTGCA (10) 5.9 0.0059 P0.5 retina GCTGCCCCAG (5) 2 0.002 P0.5 retina TATTAGTTAT (2) 2 0.002 P2.5 retina CCTGTGTGCA (10) 8.8 0.0088 P2.5 retina GAATAAAAGC (3) 3.5 0.0035 P2.5 retina AAAAGCCTTT (6) 1.8 0.0018 P2.5 retina TATTAGTTAT (2) 1.8 0.0018 P2.5 retina TATTCTTGAA (4) 1.8 0.0018 P2.5 retina TTGCTCTCAG (4) 1.8 0.0018 P4.5 retina CCTGTGTGCA (10) 5.9 0.0059 P4.5 retina TATTAGTTAT (2) 2 0.002 P4.5 retina TCTGCTCTTC (4) 2 0.002 P6.5 retina CCTGTGTGCA (10) 11.7 0.0117 P6.5 retina AGTGTTTTAA (4) 3.3 0.0033 P6.5 retina TATTAGTTAT (2) 3.3 0.0033 P6.5 retina AAAAGCCTTT (6) 1.7 0.0017 P6.5 retina AGCTCCAGGG (7) 1.7 0.0017 P6.5 retina TCTGCTCTTC (4) 1.7 0.0017 P10.5 crx- retina AGCTCCAGGG (7) 3.7 0.0037 P10.5 crx- retina TATTAGTTAT (2) 3.7 0.0037 P10.5 crx- retina TCTGCTCCTC (5) 3.7 0.0037 P10.5 crx- retina CCTGTGTGCA (10) 1.9 0.0019 P10.5 crx- retina GCTGCCCAGG (10) 1.9 0.0019 P10.5 crx- retina TGTGTTTGTA (5) 1.9 0.0019 P10.5 crx+ retina CCTGTGTGCA (10) 9.6 0.0096 P10.5 crx+ retina GAATAAAAGC (3) 5.8 0.0058 P10.5 crx+ retina AAACTTAAAA (7) 1.9 0.0019 P10.5 crx+ retina TATTAGTTAT (2) 1.9 0.0019 Adult retinal GAATAAAAGC (3) 3.7 0.0037 Adult retinal CCTGTGTGCA (10) 1.9 0.0019 Adult retinal GCTGCCCAGG (10) 1.9 0.0019 ONL AAACTTAAAA (7) 1.9 0.0019 ONL CCTGTGTGCA (10) 1.9 0.0019 ONL TATTAGTTAT (2) 1.9 0.0019 ONL TATTCTTGAA (4) 1.9 0.0019 ONL TCACCCCAAA (3) 1.9 0.0019 ONL TCTGCTCTTC (4) 1.9 0.0019