Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.220333	Nfkbib	nuclear factor of kappa light chain gene enhancer in B-cells inhibitor, beta	7		18036
Gene Ontology	nucleus
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTCCTCCC (2) 21.2 0.0212 P8 Cb GC TGCTGGGATG 8.2 0.0082 P8 Cb GC CCTCCTCCCA (2) 3.3 0.0033 P8 Cb GC TGCTGGGAAG (5) 3.3 0.0033 P8 Cb GC GGGCCCCTGA 1.6 0.0016 Cb medulloblastoma TGCTGGGATG 32.4 0.0324 Cb medulloblastoma GCCTCCTCCC (2) 18.5 0.0185 Cb medulloblastoma GGGCCCCTGA 6.9 0.0069 Cb medulloblastoma TGCTGGGAAG (5) 2.3 0.0023 P8 GC+1d culture GCCTCCTCCC (2) 42.2 0.0422 P8 GC+1d culture TGCTGGGATG 16 0.016 P8 GC+1d culture TGCTGGGAAG (5) 6.8 0.0068 P8 GC+1d culture GGGCCCCTGA 5.7 0.0057 P8 GC+1d culture CCTCCTCCCA (2) 1.1 0.0011 P8 GC+SHH+1d culture GCCTCCTCCC (2) 43.3 0.0433 P8 GC+SHH+1d culture TGCTGGGATG 26.9 0.0269 P8 GC+SHH+1d culture TGCTGGGAAG (5) 5.9 0.0059 P8 GC+SHH+1d culture GGGCCCCTGA 3.5 0.0035 P8 GC+SHH+1d culture GACCTTCTGG (2) 1.2 0.0012 3T3 fibroblasts GCCTCCTCCC (2) 31.5 0.0315 3T3 fibroblasts TGCTGGGATG 7 0.007 3T3 fibroblasts CCTCCTCCCA (2) 3.5 0.0035 E15 cortex GCCTCCTCCC (2) 59.4 0.0594 E15 cortex GGGCCCCTGA 9.9 0.0099 E15 cortex TGCTGGGAAG (5) 9.9 0.0099 E15 cortex TGCTGGGATG 9.9 0.0099 E15 cortex GACCTTCTGG (2) 4.9 0.0049 P1 cortex GCCTCCTCCC (2) 13.6 0.0136 P1 cortex TGCTGGGATG 13.6 0.0136 P1 cortex GGGCCCCTGA 4.5 0.0045 P1 cortex TGCTGGGAAG (5) 4.5 0.0045 Hypothalamus GCCTCCTCCC (2) 61.6 0.0616 Hypothalamus TGCTGGGATG 14.5 0.0145 Hypothalamus GGGCCCCTGA 7.2 0.0072 Hypothalamus TGCTGGGAAG (5) 7.2 0.0072 Hypothalamus TGCTGGGGAT (2) 1.8 0.0018 E12.5 retina GCCTCCTCCC (2) 54.4 0.0544 E12.5 retina TGCTGGGATG 22.5 0.0225 E12.5 retina GGGCCCCTGA 3.8 0.0038 E12.5 retina GCCTCATCCC (2) 1.9 0.0019 E14.5 retina GCCTCCTCCC (2) 91.1 0.0911 E14.5 retina TGCTGGGATG 21.9 0.0219 E14.5 retina CCTCCTCCCA (2) 1.8 0.0018 E14.5 retina GACCTTCTGG (2) 1.8 0.0018 E14.5 retina GCCTCATCCC (2) 1.8 0.0018 E14.5 retina TGCTGGGGAT (2) 1.8 0.0018 E16.5 retina GCCTCCTCCC (2) 77.9 0.0779 E16.5 retina TGCTGGGATG 30.8 0.0308 E16.5 retina TGCTGGGAAG (5) 3.6 0.0036 E16.5 retina GGGCCCCTGA 1.8 0.0018 E16.5 retina TGCTGGGGAT (2) 1.8 0.0018 E18.5 retina GCCTCCTCCC (2) 85.5 0.0855 E18.5 retina TGCTGGGATG 25.5 0.0255 E18.5 retina TGCTGGGAAG (5) 1.8 0.0018 P0.5 retina GCCTCCTCCC (2) 39.3 0.0393 P0.5 retina TGCTGGGATG 13.7 0.0137 P0.5 retina TGCTGGGAAG (5) 7.9 0.0079 P0.5 retina GGGCCCCTGA 2 0.002 P2.5 retina GCCTCCTCCC (2) 45.8 0.0458 P2.5 retina TGCTGGGATG 10.6 0.0106 P2.5 retina CCCCTGCTGC (2) 3.5 0.0035 P2.5 retina TGCTGGGAAG (5) 3.5 0.0035 P2.5 retina AGCCCTTCCT 1.8 0.0018 P2.5 retina GCCTCCCCCC 1.8 0.0018 P2.5 retina TGCTGGGGAT (2) 1.8 0.0018 P4.5 retina GCCTCCTCCC (2) 59.4 0.0594 P4.5 retina TGCTGGGATG 27.7 0.0277 P4.5 retina TGCTGGGAAG (5) 4 0.004 P4.5 retina CCCCTGCTGC (2) 2 0.002 P6.5 retina GCCTCCTCCC (2) 35 0.035 P6.5 retina TGCTGGGATG 15 0.015 P6.5 retina GCCTCCCCCC 3.3 0.0033 P6.5 retina GGGCCCCTGA 1.7 0.0017 P6.5 retina TGCTGGGAAG (5) 1.7 0.0017 P10.5 crx- retina GCCTCCTCCC (2) 26 0.026 P10.5 crx- retina TGCTGGGATG 13 0.013 P10.5 crx- retina TGCTGGGAAG (5) 11.1 0.0111 P10.5 crx- retina GGGCCCCTGA 1.9 0.0019 P10.5 crx+ retina GCCTCCTCCC (2) 28.8 0.0288 P10.5 crx+ retina TGCTGGGATG 15.4 0.0154 P10.5 crx+ retina TGCTGGGAAG (5) 11.5 0.0115 P10.5 crx+ retina AGCCCTTCCT 1.9 0.0019 P10.5 crx+ retina GCCTCATCCC (2) 1.9 0.0019 Adult retinal GCCTCCTCCC (2) 31.5 0.0315 Adult retinal TGCTGGGATG 13 0.013 Adult retinal TGCTGGGAAG (5) 11.1 0.0111 Adult retinal AGCCCTTCCT 1.9 0.0019 Adult retinal GACCTTCTGG (2) 1.9 0.0019 Adult retinal GGGCCCCTGA 1.9 0.0019 ONL GCCTCCTCCC (2) 9.6 0.0096 ONL TGCTGGGAAG (5) 7.7 0.0077 ONL TGCTGGGATG 5.7 0.0057